RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 IGDCC4Q8TDY8 1250 aa19.99■□□□□ 0.79
CDC42BPB-208ENST00000561271 SCFD2Q8WU76 684 aa19.99■□□□□ 0.79
CDC42BPB-208ENST00000561271 COPS5Q92905 334 aa19.99■□□□□ 0.79
CDC42BPB-208ENST00000561271 PIGSQ96S52 555 aa19.99■□□□□ 0.79
CDC42BPB-208ENST00000561271 B4DLN1 442 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 PRC1O43663 620 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 CYTH3O43739 400 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 CABYRO75952 493 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 ARIH2O95376 493 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 EIF2AK2P19525 551 aaKnown RBP19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 MRPL12P52815 198 aaKnown RBP19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 EPHB4P54760 987 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 FPGSQ05932 587 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 CASC1Q6TDU7 716 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 ZNF654Q8IZM8 581 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 TET1Q8NFU7 2136 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 NSUN6Q8TEA1 469 aaKnown RBP19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 RMDN3Q96TC7 470 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 RIOX1Q9H6W3 641 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 PCDHA1Q9Y5I3 950 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 COL6A3P12111 3177 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 GRIN2DO15399 1336 aa19.98■□□□□ 0.79
CDC42BPB-208ENST00000561271 TLR3O15455 904 aaKnown RBP19.97■□□□□ 0.79
CDC42BPB-208ENST00000561271 HSD17B4P51659 736 aa19.97■□□□□ 0.79
CDC42BPB-208ENST00000561271 ITGA7Q13683 1181 aa19.97■□□□□ 0.79
CDC42BPB-208ENST00000561271 SLC43A3Q8NBI5 491 aa19.97■□□□□ 0.79
CDC42BPB-208ENST00000561271 PIBF1Q8WXW3 757 aa19.97■□□□□ 0.79
CDC42BPB-208ENST00000561271 PPP1R12CQ9BZL4 782 aa19.97■□□□□ 0.79
CDC42BPB-208ENST00000561271 MAF1Q9H063 256 aa19.97■□□□□ 0.79
CDC42BPB-208ENST00000561271 PTPRSQ13332 1948 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 SH2B2O14492 632 aaPredicted RBP19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 TIMP1P01033 207 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 MYL3P08590 195 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 TXNP10599 105 aaKnown RBP19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 HOXA13P31271 388 aaPredicted RBP19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 MCM5P33992 734 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 CPT1AP50416 773 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 TTLL4Q14679 1199 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 NECTIN1Q15223 517 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 ARHGEF16Q5VV41 709 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 GPR153Q6NV75 609 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 SEPT14Q6ZU15 432 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 DEFB123Q8N688 67 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 CCDC136Q96JN2 1154 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 PXMP2Q9NR77 195 aa19.96■□□□□ 0.79
CDC42BPB-208ENST00000561271 NKRFO15226 690 aaKnown RBP eCLIP19.95■□□□□ 0.78
CDC42BPB-208ENST00000561271 CDC45O75419 566 aa19.95■□□□□ 0.78
CDC42BPB-208ENST00000561271 DDAH1O94760 285 aa19.95■□□□□ 0.78
CDC42BPB-208ENST00000561271 CD4P01730 458 aa19.95■□□□□ 0.78
CDC42BPB-208ENST00000561271 PURAQ00577 322 aaKnown RBP19.95■□□□□ 0.78
CDC42BPB-208ENST00000561271 GHRHRQ02643 423 aa19.95■□□□□ 0.78
CDC42BPB-208ENST00000561271 LRRC2Q9BYS8 371 aa19.95■□□□□ 0.78
CDC42BPB-208ENST00000561271 POLR3EQ9NVU0 708 aa19.95■□□□□ 0.78
CDC42BPB-208ENST00000561271 RXRAP19793 462 aa19.94■□□□□ 0.78
CDC42BPB-208ENST00000561271 STXBP2Q15833 593 aa19.94■□□□□ 0.78
CDC42BPB-208ENST00000561271 NFXL1Q6ZNB6 911 aa19.94■□□□□ 0.78
CDC42BPB-208ENST00000561271 RAB11FIP4Q86YS3 637 aa19.94■□□□□ 0.78
CDC42BPB-208ENST00000561271 CTCFLQ8NI51 663 aaPredicted RBP19.94■□□□□ 0.78
CDC42BPB-208ENST00000561271 TMEM87BQ96K49 555 aa19.94■□□□□ 0.78
CDC42BPB-208ENST00000561271 RNPC3Q96LT9 517 aaKnown RBP19.94■□□□□ 0.78
CDC42BPB-208ENST00000561271 IWS1Q96ST2 819 aa19.94■□□□□ 0.78
CDC42BPB-208ENST00000561271 TRPV6Q9H1D0 765 aa19.94■□□□□ 0.78
CDC42BPB-208ENST00000561271 PNMA6FA0A0J9YX94 578 aa19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 B4GALT4O60513 344 aa19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 LY6KQ17RY6 165 aa19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 MFSD5Q6N075 450 aa19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 CCDC62Q6P9F0 684 aa19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 IL31RAQ8NI17 732 aa19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 PPP1R13LQ8WUF5 828 aa19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 MTG1Q9BT17 334 aaPredicted RBP19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 MTA3Q9BTC8 594 aa19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 UMODL1Q5DID0 1318 aa19.93■□□□□ 0.78
CDC42BPB-208ENST00000561271 CCDC69A6NI79 296 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 PLEKHA8P1O95397 391 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 NR3C2P08235 984 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 KIF5BP33176 963 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 CYP2C18P33260 490 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 ARHGAP1Q07960 439 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 BRDTQ58F21 947 aaPredicted RBP19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 MAP3K14Q99558 947 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 PDCD2LQ9BRP1 358 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 SPZ1Q9BXG8 430 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 WDR81Q562E7 1941 aa19.92■□□□□ 0.78
CDC42BPB-208ENST00000561271 A6NJR5 290 aa19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 MYCLP12524 364 aaPredicted RBP19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 CSF2RAP15509 400 aa19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 TRAF1Q13077 416 aa19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 RNF20Q5VTR2 975 aa19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 FCHSD1Q86WN1 690 aa19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 CMTR1Q8N1G2 835 aaKnown RBP19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 AFG1LQ8WV93 481 aa19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 ALDH8A1Q9H2A2 487 aaPredicted RBP19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 HIPK3Q9H422 1215 aa19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 TRMT13Q9NUP7 481 aaKnown RBP19.91■□□□□ 0.78
CDC42BPB-208ENST00000561271 CDH23Q9H251 3354 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 GCOM1H8Y6P7 765 aaPredicted RBP19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 GH1P01241 217 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 MMP3P08254 477 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 POLR2MP0CAP2 368 aa19.9■□□□□ 0.78
CDC42BPB-208ENST00000561271 PPIGQ13427 754 aaKnown RBP eCLIP19.9■□□□□ 0.782e-7■□□□□ 8.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms