RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 MYL3P08590 195 aa18.92■□□□□ 0.62
SNX1-213ENST00000561026 CHMLP26374 656 aa18.92■□□□□ 0.62
SNX1-213ENST00000561026 UMODL1Q5DID0 1318 aa18.92■□□□□ 0.62
SNX1-213ENST00000561026 STAG2Q8N3U4 1231 aa18.92■□□□□ 0.62
SNX1-213ENST00000561026 NSUN6Q8TEA1 469 aaKnown RBP18.92■□□□□ 0.62
SNX1-213ENST00000561026 COPS5Q92905 334 aa18.92■□□□□ 0.62
SNX1-213ENST00000561026 TAAR1Q96RJ0 339 aa18.92■□□□□ 0.62
SNX1-213ENST00000561026 MTG1Q9BT17 334 aaPredicted RBP18.92■□□□□ 0.62
SNX1-213ENST00000561026 COL20A1Q9P218 1284 aa18.92■□□□□ 0.62
SNX1-213ENST00000561026 MRPL11Q9Y3B7 192 aaKnown RBP18.92■□□□□ 0.62
SNX1-213ENST00000561026 PRUNE2Q8WUY3 3088 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 CUL9Q8IWT3 2517 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 KPNA6O60684 536 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 CYP21A2P08686 494 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 SUPT20HL2P0C7V6 817 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 IRX6P78412 446 aaPredicted RBP18.91■□□□□ 0.62
SNX1-213ENST00000561026 PTH1RQ03431 593 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 TRDNQ13061 729 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 TTLL4Q14679 1199 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 MYLIPQ8WY64 445 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 IWS1Q96ST2 819 aa18.91■□□□□ 0.62
SNX1-213ENST00000561026 U3KPZ7 1027 aaPredicted RBP18.91■□□□□ 0.62
SNX1-213ENST00000561026 KLRF2D3W0D1 207 aa18.9■□□□□ 0.62
SNX1-213ENST00000561026 ARIH2O95376 493 aa18.9■□□□□ 0.62
SNX1-213ENST00000561026 FGBP02675 491 aa18.9■□□□□ 0.62
SNX1-213ENST00000561026 CCL23P55773 120 aa18.9■□□□□ 0.62
SNX1-213ENST00000561026 CCDC62Q6P9F0 684 aa18.9■□□□□ 0.62
SNX1-213ENST00000561026 HERVK_113Q902F9 699 aa18.9■□□□□ 0.62
SNX1-213ENST00000561026 RMDN3Q96TC7 470 aa18.9■□□□□ 0.62
SNX1-213ENST00000561026 WNT8AQ9H1J5 351 aa18.9■□□□□ 0.62
SNX1-213ENST00000561026 TRMT13Q9NUP7 481 aaKnown RBP18.9■□□□□ 0.62
SNX1-213ENST00000561026 GRXCR1A8MXD5 290 aa18.89■□□□□ 0.61
SNX1-213ENST00000561026 GRIN2CQ14957 1233 aa18.89■□□□□ 0.61
SNX1-213ENST00000561026 STXBP2Q15833 593 aa18.89■□□□□ 0.61
SNX1-213ENST00000561026 NBPF20Q3BBV1 942 aa18.89■□□□□ 0.61
SNX1-213ENST00000561026 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.89■□□□□ 0.61
SNX1-213ENST00000561026 MAFAQ8NHW3 353 aaPredicted RBP18.89■□□□□ 0.61
SNX1-213ENST00000561026 TIFAQ96CG3 184 aa18.89■□□□□ 0.61
SNX1-213ENST00000561026 MTMR8Q96EF0 704 aa18.89■□□□□ 0.61
SNX1-213ENST00000561026 AMNQ9BXJ7 453 aa18.89■□□□□ 0.61
SNX1-213ENST00000561026 ZNF576Q9H609 170 aa18.89■□□□□ 0.61
SNX1-213ENST00000561026 MAD2L2Q9UI95 211 aa18.89■□□□□ 0.61
SNX1-213ENST00000561026 PALM3A6NDB9 673 aaPredicted RBP18.88■□□□□ 0.61
SNX1-213ENST00000561026 CYP2C9P11712 490 aa18.88■□□□□ 0.61
SNX1-213ENST00000561026 FOSL2P15408 326 aa18.88■□□□□ 0.61
SNX1-213ENST00000561026 NFRKBQ6P4R8 1299 aa18.88■□□□□ 0.61
SNX1-213ENST00000561026 SEPT14Q6ZU15 432 aa18.88■□□□□ 0.61
SNX1-213ENST00000561026 PBX4Q9BYU1 374 aa18.88■□□□□ 0.61
SNX1-213ENST00000561026 MTIF3Q9H2K0 278 aaKnown RBP18.88■□□□□ 0.61
SNX1-213ENST00000561026 CXXC1Q9P0U4 656 aaPredicted RBP18.88■□□□□ 0.61
SNX1-213ENST00000561026 VCANP13611 3396 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 OPLAHO14841 1288 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 ZBTB5O15062 677 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 SGSM2O43147 1006 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 PPP1R11O60927 126 aaPredicted RBP18.87■□□□□ 0.61
SNX1-213ENST00000561026 CFBP00751 764 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 PBX2P40425 430 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 HSD17B4P51659 736 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 LY6KQ17RY6 165 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 ARHGEF16Q5VV41 709 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 OTOP2Q7RTS6 562 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 RPUSD2Q8IZ73 545 aaKnown RBP18.87■□□□□ 0.61
SNX1-213ENST00000561026 TAF6LQ9Y6J9 622 aa18.87■□□□□ 0.61
SNX1-213ENST00000561026 IFIT3O14879 490 aaKnown RBP18.86■□□□□ 0.61
SNX1-213ENST00000561026 EIF3JO75822 258 aaKnown RBP18.86■□□□□ 0.61
SNX1-213ENST00000561026 EIF2AK2P19525 551 aaKnown RBP18.86■□□□□ 0.61
SNX1-213ENST00000561026 GHRHRQ02643 423 aa18.86■□□□□ 0.61
SNX1-213ENST00000561026 FAM47CQ5HY64 1035 aa18.86■□□□□ 0.61
SNX1-213ENST00000561026 AFG1LQ8WV93 481 aa18.86■□□□□ 0.61
SNX1-213ENST00000561026 VWCEQ96DN2 955 aa18.86■□□□□ 0.61
SNX1-213ENST00000561026 SCLYQ96I15 445 aa18.86■□□□□ 0.61
SNX1-213ENST00000561026 PXMP2Q9NR77 195 aa18.86■□□□□ 0.61
SNX1-213ENST00000561026 MAP3K20Q9NYL2 800 aaKnown RBP18.86■□□□□ 0.61
SNX1-213ENST00000561026 PCDHA1Q9Y5I3 950 aa18.86■□□□□ 0.61
SNX1-213ENST00000561026 SCN10AQ9Y5Y9 1956 aa18.86■□□□□ 0.61
SNX1-213ENST00000561026 ERICH2A1L162 156 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 E7EWF7 191 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 GH1P01241 217 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 NR3C2P08235 984 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 PTPN11Q06124 597 aaPredicted RBP18.85■□□□□ 0.61
SNX1-213ENST00000561026 ARHGAP1Q07960 439 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 GRM4Q14833 912 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 SLC35G1Q2M3R5 365 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 RALYLQ86SE5 291 aaKnown RBP18.85■□□□□ 0.61
SNX1-213ENST00000561026 NCOA7Q8NI08 942 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 PPP1R13LQ8WUF5 828 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 SENP2Q9HC62 589 aa18.85■□□□□ 0.61
SNX1-213ENST00000561026 TROAPQ12815 778 aa18.84■□□□□ 0.61
SNX1-213ENST00000561026 SART3Q15020 963 aaKnown RBP18.84■□□□□ 0.61
SNX1-213ENST00000561026 STOX1Q6ZVD7 989 aa18.84■□□□□ 0.61
SNX1-213ENST00000561026 SAMD3Q8N6K7 520 aa18.84■□□□□ 0.61
SNX1-213ENST00000561026 MAP4K1Q92918 833 aa18.84■□□□□ 0.61
SNX1-213ENST00000561026 RIOX1Q9H6W3 641 aa18.84■□□□□ 0.61
SNX1-213ENST00000561026 DDX41Q9UJV9 622 aaKnown RBP18.84■□□□□ 0.61
SNX1-213ENST00000561026 CHD9Q3L8U1 2897 aa18.84■□□□□ 0.61
SNX1-213ENST00000561026 PFKMP08237 780 aa18.83■□□□□ 0.61
SNX1-213ENST00000561026 MMP3P08254 477 aa18.83■□□□□ 0.61
SNX1-213ENST00000561026 TRAF1Q13077 416 aa18.83■□□□□ 0.61
SNX1-213ENST00000561026 WTAPQ15007 396 aa18.83■□□□□ 0.61
SNX1-213ENST00000561026 RAB30Q15771 203 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms