RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 CCDC174Q6PII3 467 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 NEDD1Q8NHV4 660 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 ZNF775Q96BV0 537 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-211ENST00000561010 AGBL1Q96MI9 1066 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 PURBQ96QR8 312 aaKnown RBP8.59□□□□□ -1.03
GABPB1-211ENST00000561010 SLC6A16Q9GZN6 736 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 SLC38A10Q9HBR0 1119 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
GABPB1-211ENST00000561010 IL17RBQ9NRM6 502 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 CTDP1Q9Y5B0 961 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-211ENST00000561010 TANC1Q9C0D5 1861 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 KAT6AQ92794 2004 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 CDH23Q9H251 3354 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 PLIN4Q96Q06 1357 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 SCN10AQ9Y5Y9 1956 aa8.59□□□□□ -1.03
GABPB1-211ENST00000561010 ASTN1O14525 1302 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 ZNF536O15090 1300 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 REV3LO60673 3130 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 A0A0D9SFI3 127 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.58□□□□□ -1.04
GABPB1-211ENST00000561010 ERC2O15083 957 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 BMP3P12645 472 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 AKR1A1P14550 325 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 ACLYP53396 1101 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 BEX3Q00994 111 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 KCNA10Q16322 511 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 CCDC144BQ3MJ40 725 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 MUM1L1Q5H9M0 696 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 DESI1Q6ICB0 168 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 TTBK2Q6IQ55 1244 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 ARMCX2Q7L311 632 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 RNF180Q86T96 592 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 CCDC144CPQ8IYA2 1237 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 ANKRD35Q8N283 1001 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 GMCL1P1Q8NEA9 526 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 MKL1Q969V6 931 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 FAM227BQ96M60 508 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 FEM1BQ9UK73 627 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 CNPY2Q9Y2B0 182 aa8.58□□□□□ -1.04
GABPB1-211ENST00000561010 DIS3Q9Y2L1 958 aaKnown RBP8.58□□□□□ -1.04
GABPB1-211ENST00000561010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.58□□□□□ -1.04
GABPB1-211ENST00000561010 FRMPD2Q68DX3 1309 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-211ENST00000561010 LOXHD1Q8IVV2 1947 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 TSPY2A6NKD2 308 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 ATP2A1O14983 1001 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 RANBP6O60518 1105 aaKnown RBP8.57□□□□□ -1.04
GABPB1-211ENST00000561010 CLTBP09497 229 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 C6orf222P0C671 652 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-211ENST00000561010 ALAS1P13196 640 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 JUNDP17535 347 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 COPB2P35606 906 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 SLC16A2P36021 539 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 HAND2P61296 217 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 PDE4BQ07343 736 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 FAAP100Q0VG06 881 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 ACVR2BQ13705 512 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 RRP12Q5JTH9 1297 aaKnown RBP8.57□□□□□ -1.04
GABPB1-211ENST00000561010 MAMDC4Q6UXC1 1216 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 EEPD1Q7L9B9 569 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 ZNF589Q86UQ0 364 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-211ENST00000561010 FAM160A2Q8N612 972 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-211ENST00000561010 KLHDC9Q8NEP7 349 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 YTHDC1Q96MU7 727 aaKnown RBP8.57□□□□□ -1.04
GABPB1-211ENST00000561010 NACAP1Q9BZK3 213 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 KATNBL1Q9H079 304 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 TTYH1Q9H313 450 aaPredicted RBP8.57□□□□□ -1.04
GABPB1-211ENST00000561010 A1CFQ9NQ94 594 aaKnown RBP8.57□□□□□ -1.04
GABPB1-211ENST00000561010 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 TOMM22Q9NS69 142 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 RNF146Q9NTX7 359 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 FAM184BQ9ULE4 1060 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 STX8Q9UNK0 236 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 STXBP5LQ9Y2K9 1186 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 CHD9Q3L8U1 2897 aa8.57□□□□□ -1.04
GABPB1-211ENST00000561010 SYNGAP1Q96PV0 1343 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 CTAGE5O15320 804 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 RAG1P15918 1043 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 SLC1A4P43007 532 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 STAT2P52630 851 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 PDE1AP54750 535 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 NMIQ13287 307 aaPredicted RBP8.56□□□□□ -1.04
GABPB1-211ENST00000561010 CCDC96Q2M329 555 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 ZNF697Q5TEC3 545 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 FAM109BQ6ICB4 259 aaPredicted RBP8.56□□□□□ -1.04
GABPB1-211ENST00000561010 CCSAPQ6IQ19 270 aaPredicted RBP8.56□□□□□ -1.04
GABPB1-211ENST00000561010 B4GALNT3Q6L9W6 998 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 FAM133AQ8N9E0 248 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 PPP1R13LQ8WUF5 828 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 MYLIPQ8WY64 445 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 VTI1AQ96AJ9 217 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 RNPC3Q96LT9 517 aaKnown RBP8.56□□□□□ -1.04
GABPB1-211ENST00000561010 TRERF1Q96PN7 1200 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 LNPKQ9C0E8 428 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 STARD7Q9NQZ5 370 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 PDGFCQ9NRA1 345 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 TMEM39AQ9NV64 488 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 NRBP1Q9UHY1 535 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 PRR12Q9ULL5 1215 aa8.56□□□□□ -1.04
GABPB1-211ENST00000561010 NCOR1O75376 2440 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms