RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CUL9Q8IWT3 2517 aa5.33□□□□□ -1.56
HERC1-211ENST00000560983 CST3P01034 146 aaPredicted RBP5.32□□□□□ -1.56
HERC1-211ENST00000560983 PHKG2P15735 406 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 CDK8P49336 464 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 KIF23Q02241 960 aaPredicted RBP5.32□□□□□ -1.56
HERC1-211ENST00000560983 SFRP5Q5T4F7 317 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 TTBK2Q6IQ55 1244 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 THAP5Q7Z6K1 395 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 HID1Q8IV36 788 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 SYNE4Q8N205 404 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 MFSD4AQ8N468 514 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 BRIP1Q9BX63 1249 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 PICK1Q9NRD5 415 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 ZNF277Q9NRM2 450 aaPredicted RBP5.32□□□□□ -1.56
HERC1-211ENST00000560983 NARFQ9UHQ1 456 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 MUC3AQ02505 3323 aa5.32□□□□□ -1.56
HERC1-211ENST00000560983 TIAM2Q8IVF5 1701 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 HTTP42858 3142 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 PRAMEF27A3QJZ7 478 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 ERVV-2B6SEH9 535 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 PRPF40AO75400 957 aaKnown RBP5.31□□□□□ -1.56
HERC1-211ENST00000560983 PDE6BP35913 854 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 WIPI1Q5MNZ9 446 aaPredicted RBP5.31□□□□□ -1.56
HERC1-211ENST00000560983 AGMOQ6ZNB7 445 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 USP50Q70EL3 339 aaPredicted RBP5.31□□□□□ -1.56
HERC1-211ENST00000560983 MRPL41Q8IXM3 137 aaKnown RBP5.31□□□□□ -1.56
HERC1-211ENST00000560983 IFNL2Q8IZJ0 200 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 RIN3Q8TB24 985 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 COX4I2Q96KJ9 171 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 HSPA12BQ96MM6 686 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 MIPEPQ99797 713 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 TRAIPQ9BWF2 469 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 GLIS2Q9BZE0 524 aaPredicted RBP5.31□□□□□ -1.56
HERC1-211ENST00000560983 FAM53CQ9NYF3 392 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 PGAP2Q9UHJ9 254 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 TTF2Q9UNY4 1162 aaKnown RBP5.31□□□□□ -1.56
HERC1-211ENST00000560983 AK5Q9Y6K8 562 aa5.31□□□□□ -1.56
HERC1-211ENST00000560983 SOS1Q07889 1333 aaPredicted RBP5.3□□□□□ -1.56
HERC1-211ENST00000560983 SRGNP10124 158 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 EIF4BP23588 611 aaKnown RBP5.3□□□□□ -1.56
HERC1-211ENST00000560983 ZNF124Q15973 351 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 SOGA3Q5TF21 947 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 PRAMEF13Q5VWM6 474 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 FYB2Q5VWT5 728 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 STYK1Q6J9G0 422 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 LETMD1Q6P1Q0 360 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 OLFM4Q6UX06 510 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 DLK2Q6UY11 383 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 SPOCD1Q6ZMY3 1216 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 NPAS4Q8IUM7 802 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 COG3Q96JB2 828 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 FAM84AQ96KN4 292 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 CARS2Q9HA77 564 aaKnown RBP5.3□□□□□ -1.56
HERC1-211ENST00000560983 ATP13A1Q9HD20 1204 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 PCDHB5Q9Y5E4 795 aa5.3□□□□□ -1.56
HERC1-211ENST00000560983 EDC4Q6P2E9 1401 aaKnown RBP5.3□□□□□ -1.56
HERC1-211ENST00000560983 H0YGN5 161 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 EN2P19622 333 aaPredicted RBP5.29□□□□□ -1.56
HERC1-211ENST00000560983 GRK4P32298 578 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 GDNFP39905 211 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 IARSP41252 1262 aaKnown RBP5.29□□□□□ -1.56
HERC1-211ENST00000560983 KIR3DL1P43629 444 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 AFMP43652 599 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 HUNKP57058 714 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 FGD1P98174 961 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 KCNMB1Q16558 191 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 PRR5LQ6MZQ0 368 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 ZNF746Q6NUN9 644 aaPredicted RBP5.29□□□□□ -1.56
HERC1-211ENST00000560983 RGMBQ6NW40 437 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 FBXO46Q6PJ61 603 aaPredicted RBP5.29□□□□□ -1.56
HERC1-211ENST00000560983 HDGFL2Q7Z4V5 671 aaPredicted RBP5.29□□□□□ -1.56
HERC1-211ENST00000560983 ZNF296Q8WUU4 475 aaPredicted RBP5.29□□□□□ -1.56
HERC1-211ENST00000560983 MASTLQ96GX5 879 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 RNF19AQ9NV58 838 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 SCN4AP35499 1836 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 RTL1A6NKG5 1358 aa5.29□□□□□ -1.56
HERC1-211ENST00000560983 H3BS24 57 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 GLI1P08151 1106 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 CYP19A1P11511 503 aaPredicted RBP5.28□□□□□ -1.56
HERC1-211ENST00000560983 LIG3P49916 1009 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 ETF1P62495 437 aaKnown RBP5.28□□□□□ -1.56
HERC1-211ENST00000560983 SEPT6Q14141 434 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 CCDC93Q567U6 631 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 TBC1D9BQ66K14 1250 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 DNAJC10Q8IXB1 793 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 PRO3102Q9H379 93 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 ZNF408Q9H9D4 720 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 TJP2Q9UDY2 1190 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 TPX2Q9ULW0 747 aaKnown RBP5.28□□□□□ -1.56
HERC1-211ENST00000560983 LTN1O94822 1766 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 A0A1W2PP64 1363 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 TONSLQ96HA7 1378 aa5.28□□□□□ -1.56
HERC1-211ENST00000560983 LRRC10BA6NIK2 292 aa5.27□□□□□ -1.57
HERC1-211ENST00000560983 PATL2C9JE40 543 aaKnown RBP5.27□□□□□ -1.57
HERC1-211ENST00000560983 RBAK-RBAKDNI3L0D1 243 aa5.27□□□□□ -1.57
HERC1-211ENST00000560983 FYB1O15117 783 aa5.27□□□□□ -1.57
HERC1-211ENST00000560983 KRT1P04264 644 aa5.27□□□□□ -1.57
HERC1-211ENST00000560983 TFE3P19532 575 aaPredicted RBP5.27□□□□□ -1.57
HERC1-211ENST00000560983 TNK2Q07912 1038 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms