RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TMTC3Q6ZXV5 915 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 KLHL7Q8IXQ5 586 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 NOC3LQ8WTT2 800 aaKnown RBP18.25■□□□□ 0.51
TPM1-228ENST00000560975 LPIN2Q92539 896 aa18.25■□□□□ 0.51
TPM1-228ENST00000560975 GOLGA6L10A6NI86 522 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 IRS4O14654 1257 aaPredicted RBP18.24■□□□□ 0.51
TPM1-228ENST00000560975 GNAT2P19087 354 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 CCNE1P24864 410 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 TROAPQ12815 778 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 SF3A3Q12874 501 aaKnown RBP eCLIP18.24■□□□□ 0.519e-9■■■■□ 23.4
TPM1-228ENST00000560975 KCNB1Q14721 858 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 NOX5Q96PH1 765 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 OSBPL7Q9BZF2 842 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 TMEM60Q9H2L4 133 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 FER1L4A9Z1Z3 1794 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 MYH2Q9UKX2 1941 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 HMGB1P1B2RPK0 211 aaPredicted RBP18.24■□□□□ 0.51
TPM1-228ENST00000560975 NMT2O60551 498 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 PPP2R5BQ15173 497 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 GLE1Q53GS7 698 aaKnown RBP18.24■□□□□ 0.51
TPM1-228ENST00000560975 DTHD1Q6ZMT9 781 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 FAM228AQ86W67 206 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 FUKQ8N0W3 1084 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 C4orf32Q8N8J7 132 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 DHTKD1Q96HY7 919 aaPredicted RBP18.24■□□□□ 0.51
TPM1-228ENST00000560975 CNTNAP5Q8WYK1 1306 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 OPLAHO14841 1288 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 CYP7A1P22680 504 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 BCAMP50895 628 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 TDRD12Q587J7 1177 aaKnown RBP18.24■□□□□ 0.51
TPM1-228ENST00000560975 ADGRA1Q86SQ6 560 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 GPKOWQ92917 476 aaPredicted RBP eCLIP18.24■□□□□ 0.51
TPM1-228ENST00000560975 ERGIC2Q96RQ1 377 aa18.24■□□□□ 0.51
TPM1-228ENST00000560975 RBM28Q9NW13 759 aaKnown RBP18.24■□□□□ 0.51
TPM1-228ENST00000560975 FAM205AQ6ZU69 1335 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 A0A1W2PQJ5 194 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 SCG2P13521 617 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 PAX7P23759 505 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 ASIC1P78348 528 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 PPP2R5AQ15172 486 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 ODF2Q5BJF6 829 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 FAM114A1Q8IWE2 563 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 TPX2Q9ULW0 747 aaKnown RBP18.23■□□□□ 0.51
TPM1-228ENST00000560975 RPSAP08865 295 aaKnown RBP18.23■□□□□ 0.51
TPM1-228ENST00000560975 PLCB4Q15147 1175 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 ABCF2Q9UG63 623 aa18.23■□□□□ 0.51
TPM1-228ENST00000560975 GMNCA6NCL1 334 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 PALMO75781 387 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 TRAPPC10P48553 1259 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 WLSQ5T9L3 541 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 ARL6IP4Q66PJ3 421 aaKnown RBP18.22■□□□□ 0.51
TPM1-228ENST00000560975 MTA3Q9BTC8 594 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
TPM1-228ENST00000560975 BICDL2A1A5D9 508 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 RAD51CO43502 376 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 NEBLO76041 1014 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 SLC5A1P13866 664 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 TRIM28Q13263 835 aaKnown RBP18.22■□□□□ 0.51
TPM1-228ENST00000560975 ENOX2Q16206 610 aaKnown RBP18.22■□□□□ 0.51
TPM1-228ENST00000560975 CD302Q8IX05 232 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 TACO1Q9BSH4 297 aaKnown RBP18.22■□□□□ 0.51
TPM1-228ENST00000560975 TMBIM4Q9HC24 238 aa18.22■□□□□ 0.51
TPM1-228ENST00000560975 GCOM1H8Y6P7 765 aaPredicted RBP18.21■□□□□ 0.51
TPM1-228ENST00000560975 MYZAPP0CAP1 466 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 CLNS1AP54105 237 aaKnown RBP18.21■□□□□ 0.51
TPM1-228ENST00000560975 EVX2Q03828 476 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 PTPROQ16827 1216 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 NLRP10Q86W26 655 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 CCDC155Q8N6L0 562 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 SLC24A3Q9HC58 644 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 PNPLA7Q6ZV29 1317 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 EHHADHQ08426 723 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 ANKRD20A8PQ5CZ79 823 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 FIGNQ5HY92 759 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 PPP4R3AQ6IN85 833 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 DDX42Q86XP3 938 aaKnown RBP eCLIP18.21■□□□□ 0.51
TPM1-228ENST00000560975 SLC39A2Q9NP94 309 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 NLRC4Q9NPP4 1024 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 KBTBD4Q9NVX7 518 aa18.21■□□□□ 0.51
TPM1-228ENST00000560975 TIAM2Q8IVF5 1701 aa18.21■□□□□ 0.5
TPM1-228ENST00000560975 PPP1R12BO60237 982 aaPredicted RBP18.2■□□□□ 0.5
TPM1-228ENST00000560975 GCFC2P16383 781 aaKnown RBP18.2■□□□□ 0.5
TPM1-228ENST00000560975 PLCG1P19174 1290 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 VWA3BQ502W6 1294 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 EMC10Q5UCC4 262 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 CACNA2D4Q7Z3S7 1137 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 ZSCAN29Q8IWY8 852 aaPredicted RBP18.2■□□□□ 0.5
TPM1-228ENST00000560975 MREGQ8N565 214 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 NDST4Q9H3R1 872 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 ACTR5Q9H9F9 607 aaPredicted RBP18.2■□□□□ 0.5
TPM1-228ENST00000560975 SIK3Q9Y2K2 1263 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 LEMD3Q9Y2U8 911 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 CCDC189A1A4V9 331 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 EZRP15311 586 aaKnown RBP18.2■□□□□ 0.5
TPM1-228ENST00000560975 FGFR2P21802 821 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 WHAMMQ8TF30 809 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 SGSM3Q96HU1 749 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 SEC16BQ96JE7 1060 aa18.2■□□□□ 0.5
TPM1-228ENST00000560975 HNRNPH3P31942 346 aaKnown RBP18.2■□□□□ 0.5
TPM1-228ENST00000560975 HSD17B3P37058 310 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms