RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 A1CFQ9NQ94 594 aaKnown RBP8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 HOMER2Q9NSB8 354 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 TSKSQ9UJT2 592 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 PNMA2Q9UL42 364 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 SMC3Q9UQE7 1217 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 CTDP1Q9Y5B0 961 aaPredicted RBP8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 PCDHA1Q9Y5I3 950 aa8.1□□□□□ -1.11
CTDSPL2-210ENST00000560834 MYH7BA7E2Y1 1941 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 GPR25O00155 361 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 HSPA1AP0DMV8 641 aaKnown RBP8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 HSPA1BP0DMV9 641 aaKnown RBP8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 CLK2P49760 499 aaKnown RBP8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 HSD17B4P51659 736 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 CCNA1P78396 465 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 LACTBP83111 547 aaPredicted RBP8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 LSM11P83369 360 aaKnown RBP eCLIP8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 AMHR2Q16671 573 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 GPR142Q7Z601 462 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 NCAPG2Q86XI2 1143 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 FAM177A1Q8N128 213 aaPredicted RBP8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 DAGLBQ8NCG7 672 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 CHST13Q8NET6 341 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 CCDC148Q8NFR7 591 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 WASF1Q92558 559 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 FGD4Q96M96 766 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 PHF20Q9BVI0 1012 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 ZMYND12Q9H0C1 365 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 MROH8Q9H579 483 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 SH3GLB2Q9NR46 395 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 COL20A1Q9P218 1284 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 FBXO40Q9UH90 709 aa8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 MRPL11Q9Y3B7 192 aaKnown RBP8.09□□□□□ -1.11
CTDSPL2-210ENST00000560834 CENPFP49454 3210 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 DOCK3Q8IZD9 2030 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 ASTN1O14525 1302 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 PFASO15067 1338 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 FRMPD4Q14CM0 1322 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 DNAJC25-GNG10A0A024R161 153 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 M0R2N6 131 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 PIK3CDO00329 1044 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 MEIS2O14770 477 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 FOXN1O15353 648 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 SLC34A2O95436 690 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 MMP1P03956 469 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 HSPA8P11142 646 aaKnown RBP8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 PTPREP23469 700 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 MAPK4P31152 587 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 DDIT3P35638 169 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 SLC4A3P48751 1232 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 ADCY7P51828 1080 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 GUCY1B3Q02153 619 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 SP3Q02447 781 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 TRAF1Q13077 416 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 GRB14Q14449 540 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 UBE2SQ16763 222 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 MORN1Q5T089 497 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 KRT40Q6A162 431 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 FAM184AQ8NB25 1140 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 CD99L2Q8TCZ2 262 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 CCDC12Q8WUD4 166 aaPredicted RBP8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 ZNF296Q8WUU4 475 aaPredicted RBP8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 TBC1D5Q92609 795 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 TNFRSF25Q93038 417 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 C8orf76Q96K31 380 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 TRIM47Q96LD4 638 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 MMP19Q99542 508 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 RIC8AQ9NPQ8 531 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 CYP39A1Q9NYL5 469 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 KCNJ14Q9UNX9 436 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 FRMPD3Q5JV73 1810 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 MCM3APO60318 1980 aa8.08□□□□□ -1.12
CTDSPL2-210ENST00000560834 RPTORQ8N122 1335 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 SMCO2A6NFE2 343 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 TNPO2O14787 897 aaKnown RBP8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 FKTNO75072 461 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 ADORA2AP29274 412 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 HOXA13P31271 388 aaPredicted RBP8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 FCGRTP55899 365 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 RPS6P62753 249 aaKnown RBP8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 WDR78Q5VTH9 848 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 NSMFQ6X4W1 530 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 RNF207Q6ZRF8 634 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 PLEKHH3Q7Z736 793 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 ABRAQ8N0Z2 381 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 RGS22Q8NE09 1264 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 FBXO18Q8NFZ0 1043 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 RASGRP4Q8TDF6 673 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 SYTL5Q8TDW5 730 aaPredicted RBP8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 USP6NLQ92738 828 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 CUL5Q93034 780 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 PURBQ96QR8 312 aaKnown RBP8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 BEGAINQ9BUH8 593 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 MAF1Q9H063 256 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 TMEM260Q9NX78 707 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 PCDHA4Q9UN74 947 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 KIF3AQ9Y496 699 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 KIAA1217Q5T5P2 1943 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 BRCA2P51587 3418 aa8.07□□□□□ -1.12
CTDSPL2-210ENST00000560834 SOWAHBA6NEL2 793 aa8.06□□□□□ -1.12
CTDSPL2-210ENST00000560834 SLC15A5A6NIM6 579 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms