RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MTMR2Q13614 643 aa14.54□□□□□ -0.08
SNX1-211ENST00000560829 PRAMEF18Q5VWM3 479 aa14.54□□□□□ -0.08
SNX1-211ENST00000560829 SLFN12Q8IYM2 578 aa14.54□□□□□ -0.08
SNX1-211ENST00000560829 LRRC15Q8TF66 581 aa14.54□□□□□ -0.08
SNX1-211ENST00000560829 STAMQ92783 540 aa14.54□□□□□ -0.08
SNX1-211ENST00000560829 ZKSCAN4Q969J2 545 aaPredicted RBP14.54□□□□□ -0.08
SNX1-211ENST00000560829 ZKSCAN5Q9Y2L8 839 aa14.54□□□□□ -0.08
SNX1-211ENST00000560829 SBF1O95248 1867 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 ATAD5Q96QE3 1844 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 GOLGA6L6A8MZA4 724 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 FDX1P10109 184 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 SPP2Q13103 211 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 KCNB1Q14721 858 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 C9orf131Q5VYM1 1079 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.53□□□□□ -0.088e-11■□□□□ 8.9
SNX1-211ENST00000560829 ETNPPLQ8TBG4 499 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 LENG9Q96B70 501 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 BLZF1Q9H2G9 400 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 SLC38A10Q9HBR0 1119 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 STK17AQ9UEE5 414 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 PNMA2Q9UL42 364 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 PPP1R9AQ9ULJ8 1098 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 PCDHA12Q9UN75 941 aa14.53□□□□□ -0.08
SNX1-211ENST00000560829 C19orf81C9J6K1 198 aa14.52□□□□□ -0.08
SNX1-211ENST00000560829 RPN1P04843 607 aaKnown RBP14.52□□□□□ -0.08
SNX1-211ENST00000560829 HOXA13P31271 388 aaPredicted RBP14.52□□□□□ -0.08
SNX1-211ENST00000560829 GRB10Q13322 594 aa14.52□□□□□ -0.08
SNX1-211ENST00000560829 HYIQ5T013 277 aa14.52□□□□□ -0.08
SNX1-211ENST00000560829 KRT79Q5XKE5 535 aa14.52□□□□□ -0.08
SNX1-211ENST00000560829 L3MBTL3Q96JM7 780 aaPredicted RBP14.52□□□□□ -0.08
SNX1-211ENST00000560829 PNMA5Q96PV4 448 aa14.52□□□□□ -0.08
SNX1-211ENST00000560829 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.52□□□□□ -0.08
SNX1-211ENST00000560829 DOCK1Q14185 1865 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 POTEMA6NI47 508 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 CFBP00751 764 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 HSD17B4P51659 736 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 FMR1Q06787 632 aaKnown RBP eCLIP14.52□□□□□ -0.09
SNX1-211ENST00000560829 TMEM119Q4V9L6 283 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 TBC1D5Q92609 795 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 FAM20AQ96MK3 541 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 MED15Q96RN5 788 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 C7orf25Q9BPX7 421 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 RPAP3Q9H6T3 665 aaPredicted RBP14.52□□□□□ -0.09
SNX1-211ENST00000560829 CCPG1Q9ULG6 757 aa14.52□□□□□ -0.09
SNX1-211ENST00000560829 PPP1R3GB7ZBB8 358 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 FAM86B1E9PN63 330 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 KLRC4O43908 158 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 MARCH6O60337 910 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 FLOT1O75955 427 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 FAM86B2P0C5J1 330 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 AMPD3Q01432 767 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 DGKZQ13574 1117 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 ZNF658Q5TYW1 1059 aaPredicted RBP14.51□□□□□ -0.09
SNX1-211ENST00000560829 SAMD3Q8N6K7 520 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 SNX29Q8TEQ0 813 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 AGBL1Q96MI9 1066 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 TANGO6Q9C0B7 1094 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 EHMT1Q9H9B1 1298 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 RRAGDQ9NQL2 400 aaPredicted RBP14.51□□□□□ -0.09
SNX1-211ENST00000560829 BLOC1S4Q9NUP1 217 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 MAP3K20Q9NYL2 800 aaKnown RBP14.51□□□□□ -0.09
SNX1-211ENST00000560829 ZHX2Q9Y6X8 837 aa14.51□□□□□ -0.09
SNX1-211ENST00000560829 ZC3H4Q9UPT8 1303 aaKnown RBP14.51□□□□□ -0.09
SNX1-211ENST00000560829 IGLV3-22A0A075B6J6 115 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 USP2O75604 605 aaPredicted RBP14.5□□□□□ -0.09
SNX1-211ENST00000560829 RHOBTB3O94955 611 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
SNX1-211ENST00000560829 ZNF18P17022 549 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 SPIRE1Q08AE8 756 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 PRR16Q569H4 304 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 CLEC4DQ8WXI8 215 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 DCPSQ96C86 337 aaKnown RBP14.5□□□□□ -0.09
SNX1-211ENST00000560829 PLIN2Q99541 437 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 TRIM9Q9C026 710 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 FANCLQ9NW38 375 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 KDM3AQ9Y4C1 1321 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 DPY19L2Q6NUT2 758 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 CNNM4Q6P4Q7 775 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 FCHSD1Q86WN1 690 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 MCF2L2Q86YR7 1114 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 SPC24Q8NBT2 197 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 CDK5RAP3Q96JB5 506 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 NUDT12Q9BQG2 462 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 GTPBP4Q9BZE4 634 aaKnown RBP14.5□□□□□ -0.09
SNX1-211ENST00000560829 NT5C3AQ9H0P0 336 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 FZD1Q9UP38 647 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 RABGAP1Q9Y3P9 1069 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 NFE2L3Q9Y4A8 694 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 STK24Q9Y6E0 443 aa14.5□□□□□ -0.09
SNX1-211ENST00000560829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.5□□□□□ -0.09
SNX1-211ENST00000560829 ZBED4O75132 1171 aa14.49□□□□□ -0.09
SNX1-211ENST00000560829 ATP1A3P13637 1013 aa14.49□□□□□ -0.09
SNX1-211ENST00000560829 FANCCQ00597 558 aa14.49□□□□□ -0.09
SNX1-211ENST00000560829 SH3D19Q5HYK7 790 aa14.49□□□□□ -0.09
SNX1-211ENST00000560829 SPATA1Q5VX52 437 aa14.49□□□□□ -0.09
SNX1-211ENST00000560829 USP50Q70EL3 339 aaPredicted RBP14.49□□□□□ -0.09
SNX1-211ENST00000560829 SV2BQ7L1I2 683 aa14.49□□□□□ -0.09
SNX1-211ENST00000560829 SULF1Q8IWU6 871 aa14.49□□□□□ -0.09
SNX1-211ENST00000560829 ZC3H15Q8WU90 426 aaKnown RBP14.49□□□□□ -0.09
SNX1-211ENST00000560829 LARP4BQ92615 738 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms