RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 VTA1Q9NP79 307 aa13.06□□□□□ -0.32
GABPB1-210ENST00000560825 RBM8AQ9Y5S9 174 aaKnown RBP13.06□□□□□ -0.32
GABPB1-210ENST00000560825 GRXCR1A8MXD5 290 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 KLRF2D3W0D1 207 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 B4GALT4O60513 344 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 ACRP10323 421 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 CSF2RAP15509 400 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 RAG1P15918 1043 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 ASPRV1Q53RT3 343 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 RAB11FIP4Q86YS3 637 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 IL31RAQ8NI17 732 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 PIGSQ96S52 555 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.05□□□□□ -0.32
GABPB1-210ENST00000560825 CNNM2Q9H8M5 875 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 A0A0U1RQG5 324 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-210ENST00000560825 DCDC2CA8MYV0 355 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 DHX16O60231 1041 aaKnown RBP13.05□□□□□ -0.32
GABPB1-210ENST00000560825 TIMP1P01033 207 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 HOXA13P31271 388 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-210ENST00000560825 TROAPQ12815 778 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 ITGA7Q13683 1181 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 GRM4Q14833 912 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 LY6KQ17RY6 165 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 PIBF1Q8WXW3 757 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 GPKOWQ92917 476 aaPredicted RBP eCLIP13.05□□□□□ -0.32
GABPB1-210ENST00000560825 WNT8AQ9H1J5 351 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 BCAS3Q9H6U6 928 aa13.05□□□□□ -0.32
GABPB1-210ENST00000560825 TRMT13Q9NUP7 481 aaKnown RBP13.05□□□□□ -0.32
GABPB1-210ENST00000560825 IFIT3O14879 490 aaKnown RBP13.04□□□□□ -0.32
GABPB1-210ENST00000560825 SORBS3O60504 671 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 RGS20O76081 388 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
GABPB1-210ENST00000560825 PURAQ00577 322 aaKnown RBP13.04□□□□□ -0.32
GABPB1-210ENST00000560825 FPGSQ05932 587 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 PDE4DQ08499 809 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 CCDC62Q6P9F0 684 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 FBXO11Q86XK2 927 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 CMTR1Q8N1G2 835 aaKnown RBP13.04□□□□□ -0.32
GABPB1-210ENST00000560825 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 LRRC2Q9BYS8 371 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 AP5M1Q9H0R1 490 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 LY9Q9HBG7 655 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 ADD3Q9UEY8 706 aaKnown RBP13.04□□□□□ -0.32
GABPB1-210ENST00000560825 TELO2Q9Y4R8 837 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 ABCB11O95342 1321 aa13.04□□□□□ -0.32
GABPB1-210ENST00000560825 TET1Q8NFU7 2136 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 SLC27A2O14975 620 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 CFBP00751 764 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 MYL3P08590 195 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 RXRAP19793 462 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 PBX2P40425 430 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 TMEM240Q5SV17 173 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 MFSD5Q6N075 450 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 SEPT14Q6ZU15 432 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 RGS22Q8NE09 1264 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 OR6J1Q8NGC5 347 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 SCLYQ96I15 445 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 CTAGE1Q96RT6 745 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 RIOX1Q9H6W3 641 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 SPC25Q9HBM1 224 aa13.03□□□□□ -0.32
GABPB1-210ENST00000560825 CXXC1Q9P0U4 656 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-210ENST00000560825 TXNP10599 105 aaKnown RBP13.02□□□□□ -0.33
GABPB1-210ENST00000560825 CYP2C9P11712 490 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 HSD17B4P51659 736 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 CCL23P55773 120 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 SP2Q02086 613 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 ARHGAP1Q07960 439 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 CCDC178Q5BJE1 867 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 GPR153Q6NV75 609 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 DNERQ8NFT8 737 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 NCOA7Q8NI08 942 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 RUFY2Q8WXA3 655 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 RNPC3Q96LT9 517 aaKnown RBP13.02□□□□□ -0.33
GABPB1-210ENST00000560825 RMDN3Q96TC7 470 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 NOC4LQ9BVI4 516 aaKnown RBP13.02□□□□□ -0.33
GABPB1-210ENST00000560825 PXMP2Q9NR77 195 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 Q9Y3F1 56 aa13.02□□□□□ -0.33
GABPB1-210ENST00000560825 MUC3AQ02505 3323 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 ZBTB5O15062 677 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 PLEKHA8P1O95397 391 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 WTAPQ15007 396 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 PPP2R5BQ15173 497 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 NECTIN1Q15223 517 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 ZNF365Q70YC5 407 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 AFG1LQ8WV93 481 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 ALDH8A1Q9H2A2 487 aaPredicted RBP13.01□□□□□ -0.33
GABPB1-210ENST00000560825 PCDHA1Q9Y5I3 950 aa13.01□□□□□ -0.33
GABPB1-210ENST00000560825 MROH7Q68CQ1 1323 aa13□□□□□ -0.33
GABPB1-210ENST00000560825 A6NJR5 290 aa13□□□□□ -0.33
GABPB1-210ENST00000560825 GHRHRQ02643 423 aa13□□□□□ -0.33
GABPB1-210ENST00000560825 HIC1Q14526 733 aa13□□□□□ -0.33
GABPB1-210ENST00000560825 RASIP1Q5U651 963 aa13□□□□□ -0.33
GABPB1-210ENST00000560825 CREB3L3Q68CJ9 461 aa13□□□□□ -0.33
GABPB1-210ENST00000560825 RASEFQ8IZ41 740 aa13□□□□□ -0.33
GABPB1-210ENST00000560825 SCFD2Q8WU76 684 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms