RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 PTPAQ15257 358 aa6.19□□□□□ -1.42
ZEB1-219ENST00000560721 NBPF12Q5TAG4 269 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-219ENST00000560721 ZNF746Q6NUN9 644 aaPredicted RBP6.19□□□□□ -1.42
ZEB1-219ENST00000560721 CCDC129Q6ZRS4 1044 aa6.19□□□□□ -1.42
ZEB1-219ENST00000560721 SH3RF1Q7Z6J0 888 aa6.19□□□□□ -1.42
ZEB1-219ENST00000560721 SRBD1Q8N5C6 995 aaKnown RBP6.19□□□□□ -1.42
ZEB1-219ENST00000560721 SPATA18Q8TC71 538 aa6.19□□□□□ -1.42
ZEB1-219ENST00000560721 EDC3Q96F86 508 aaKnown RBP6.19□□□□□ -1.42
ZEB1-219ENST00000560721 NIFKQ9BYG3 293 aaKnown RBP6.19□□□□□ -1.42
ZEB1-219ENST00000560721 C6orf50Q9HD87 102 aa6.19□□□□□ -1.42
ZEB1-219ENST00000560721 PRR12Q9ULL5 1215 aa6.19□□□□□ -1.42
ZEB1-219ENST00000560721 HAS3O00219 553 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 KIAA0391O15091 583 aaKnown RBP6.18□□□□□ -1.42
ZEB1-219ENST00000560721 EDIL3O43854 480 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 KDM4AO75164 1064 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 JAG1P78504 1218 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 KIF23Q02241 960 aaPredicted RBP6.18□□□□□ -1.42
ZEB1-219ENST00000560721 TMEM119Q4V9L6 283 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 PPP4R3CPQ6ZMV5 832 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 UBE2Q1Q7Z7E8 422 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 MAPKAPK5Q8IW41 473 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 C12orf56Q8IXR9 622 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 ABCF2Q9UG63 623 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 MTMR6Q9Y217 621 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 NLRC5Q86WI3 1866 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 MEIS1O00470 390 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 MEIS2O14770 477 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 ARID5BQ14865 1188 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 IQSEC1Q6DN90 963 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 POTEEQ6S8J3 1075 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 TRIML1Q8N9V2 468 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 ETNPPLQ8TBG4 499 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 SDR42E1Q8WUS8 393 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 SCAND2PQ9GZW5 306 aaPredicted RBP6.18□□□□□ -1.42
ZEB1-219ENST00000560721 ACAD9Q9H845 621 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 JADE2Q9NQC1 790 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 TBC1D22BQ9NU19 505 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 STK17AQ9UEE5 414 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 TSPY2A6NKD2 308 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 IFIT3O14879 490 aaKnown RBP6.18□□□□□ -1.42
ZEB1-219ENST00000560721 PIGRP01833 764 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 EHHADHQ08426 723 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 CHAF1AQ13111 956 aaPredicted RBP6.18□□□□□ -1.42
ZEB1-219ENST00000560721 GRM1Q13255 1194 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 BMT2Q1RMZ1 405 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 ADGRF4Q8IZF3 695 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 SLAIN1Q8ND83 568 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 KCNG4Q8TDN1 519 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 CUL5Q93034 780 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 STRA6Q9BX79 667 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 UPF3BQ9BZI7 483 aaKnown RBP6.18□□□□□ -1.42
ZEB1-219ENST00000560721 TMEM39BQ9GZU3 492 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 ZFYVE28Q9HCC9 887 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 RNF216Q9NWF9 866 aaPredicted RBP6.18□□□□□ -1.42
ZEB1-219ENST00000560721 WBP1LQ9NX94 342 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 ADD3Q9UEY8 706 aaKnown RBP6.18□□□□□ -1.42
ZEB1-219ENST00000560721 PRDM4Q9UKN5 801 aa6.18□□□□□ -1.42
ZEB1-219ENST00000560721 NOLC1Q14978 699 aaKnown RBP eCLIP6.17□□□□□ -1.42
ZEB1-219ENST00000560721 FAM187BQ17R55 369 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 IFFO2Q5TF58 517 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 CCDC62Q6P9F0 684 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 CNPY4Q8N129 248 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 BRI3BPQ8WY22 251 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 ZNF396Q96N95 335 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-219ENST00000560721 CEP89Q96ST8 783 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 APBA2Q99767 749 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 PDLIM7Q9NR12 457 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 CFAP45Q9UL16 551 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 CNPY2Q9Y2B0 182 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 SRPRBQ9Y5M8 271 aaKnown RBP6.17□□□□□ -1.42
ZEB1-219ENST00000560721 IGKV6-21A0A0C4DH24 114 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 B4E1Z4 1266 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 CUTAO60888 179 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 TPM3P06753 285 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 RFC2P35250 354 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 SPIRE1Q08AE8 756 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 CCSAPQ6IQ19 270 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-219ENST00000560721 VSIG10LQ86VR7 867 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 KIAA1958Q8N8K9 716 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 ZNF784Q8NCA9 323 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-219ENST00000560721 LENG9Q96B70 501 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 OPTNQ96CV9 577 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 WDR11Q9BZH6 1224 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 BRMS1Q9HCU9 246 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 ANKEF1Q9NU02 776 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 STK39Q9UEW8 545 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 PCDHA6Q9UN73 950 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 PCDHA8Q9Y5H6 950 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 GOLGA8AA7E2F4 631 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 GOLGA8BA8MQT2 603 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 SNAP23O00161 211 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 CTAGE5O15320 804 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 ADCY5O95622 1261 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 EGFRP00533 1210 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 HOXD10P28358 340 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 CDC27P30260 824 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 KRT2P35908 639 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 JAK3P52333 1124 aa6.17□□□□□ -1.42
ZEB1-219ENST00000560721 MKRN4PQ13434 485 aaPredicted RBP6.17□□□□□ -1.42
ZEB1-219ENST00000560721 KCNB1Q14721 858 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms