RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TBC1D20Q96BZ9 403 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 RSAD1Q9HA92 442 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 PDRG1Q9NUG6 133 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 MAPRE3Q9UPY8 281 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 ADAMTS13Q76LX8 1427 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 CDC42BPGQ6DT37 1551 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 MAP2P11137 1827 aaKnown RBP7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 A0A087WUV0 522 aaPredicted RBP7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 LRRC10BA6NIK2 292 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 BACH1O14867 736 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 SGSM2O43147 1006 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 CD4P01730 458 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 GSTT1P30711 240 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 USP8P40818 1118 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 IGF2-ASQ6U949 168 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 CCAR2Q8N163 923 aaKnown RBP7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 TCP11L2Q8N4U5 519 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 C1orf127Q8N9H9 656 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 THAP11Q96EK4 314 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 MYO19Q96H55 970 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 SPATA9Q9BWV2 254 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 TRIM5Q9C035 493 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 CSRNP2Q9H175 543 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 ALG13Q9NP73 1137 aaKnown RBP7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 NLRC4Q9NPP4 1024 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 CLIP2Q9UDT6 1046 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 TMX2Q9Y320 296 aa7.58□□□□□ -1.2
TSPAN3-209ENST00000560715 ARHGAP23Q9P227 1491 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 EDC4Q6P2E9 1401 aaKnown RBP7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 PPIP5K1Q6PFW1 1433 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 PNPLA6Q8IY17 1366 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 BICDL2A1A5D9 508 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 METTL12A8MUP2 240 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 EML1O00423 815 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 SEC31AO94979 1220 aaKnown RBP7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 PCSK2P16519 638 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 GRIA2P42262 883 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 MNAT1P51948 309 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 INHBEP58166 350 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 C1orf122Q6ZSJ8 110 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 TOGARAM2Q6ZUX3 1019 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 OTUD6BQ8N6M0 293 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 LRRN4CLQ8ND94 238 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 MIEF2Q96C03 454 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 FAXDC2Q96IV6 333 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 PHACTR1Q9C0D0 580 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 POTEFA5A3E0 1075 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 SKILP12757 684 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 USP14P54578 494 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 FOXK2Q01167 660 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 PWP1Q13610 501 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 SLC45A4Q5BKX6 768 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 FOXR1Q6PIV2 292 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 LUZP1Q86V48 1076 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 SLITRK4Q8IW52 837 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 CCDC144CPQ8IYA2 1237 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 FBXO41Q8TF61 875 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 OXCT2Q9BYC2 517 aaPredicted RBP7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 SRCIN1Q9C0H9 1055 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 BLOC1S4Q9NUP1 217 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 CNPY2Q9Y2B0 182 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 TUBB4AP04350 444 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 SLC5A1P13866 664 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 IRX1P78414 480 aaPredicted RBP7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 INTS6LQ5JSJ4 861 aaKnown RBP7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 CCDC158Q5M9N0 1113 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 SLC41A1Q8IVJ1 513 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 FAM26EQ8N5C1 309 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 CDC6Q99741 560 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 A1CFQ9NQ94 594 aaKnown RBP7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 SMYD2Q9NRG4 433 aa7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 RRP7AQ9Y3A4 280 aaKnown RBP7.57□□□□□ -1.2
TSPAN3-209ENST00000560715 DIP2AQ14689 1571 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 TOPAZ1Q8N9V7 1692 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 MPHOSPH10O00566 681 aaKnown RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 U2AF1L5P0DN76 240 aaPredicted RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 KRT20P35900 424 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 U2AF1Q01081 240 aaKnown RBP eCLIP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 HLTFQ14527 1009 aaKnown RBP eCLIP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 MINDY4Q4G0A6 757 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 CATIPQ7Z7H3 387 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 CBARPQ8N350 705 aaPredicted RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 FAM160A2Q8N612 972 aaPredicted RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 KCTD15Q96SI1 283 aaPredicted RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 PDGFDQ9GZP0 370 aaPredicted RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 GPR52Q9Y2T5 361 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 TNPO3Q9Y5L0 923 aaKnown RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 A0A1W2PQH9 124 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 DNAJC8O75937 253 aaPredicted RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 MTA2O94776 668 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 CCND1P24385 295 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 TTC22Q5TAA0 569 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 TTBK2Q6IQ55 1244 aa7.56□□□□□ -1.2
TSPAN3-209ENST00000560715 KRT77Q7Z794 578 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms