RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 NIM1KQ8IY84 436 aa13.78□□□□□ -0.2
SYNM-203ENST00000560674 NME8Q8N427 588 aa13.78□□□□□ -0.2
SYNM-203ENST00000560674 SDCCAG3Q96C92 435 aa13.78□□□□□ -0.2
SYNM-203ENST00000560674 NT5C1BQ96P26 610 aa13.78□□□□□ -0.2
SYNM-203ENST00000560674 TPX2Q9ULW0 747 aaKnown RBP13.78□□□□□ -0.2
SYNM-203ENST00000560674 SOS2Q07890 1332 aaPredicted RBP13.78□□□□□ -0.2
SYNM-203ENST00000560674 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
SYNM-203ENST00000560674 PGRMC1O00264 195 aaKnown RBP13.77□□□□□ -0.2
SYNM-203ENST00000560674 ICA1Q05084 483 aa13.77□□□□□ -0.2
SYNM-203ENST00000560674 MAN2A1Q16706 1144 aa13.77□□□□□ -0.2
SYNM-203ENST00000560674 RNF168Q8IYW5 571 aaPredicted RBP13.77□□□□□ -0.2
SYNM-203ENST00000560674 TRIM11Q96F44 468 aa13.77□□□□□ -0.2
SYNM-203ENST00000560674 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.2
SYNM-203ENST00000560674 ZNF408Q9H9D4 720 aa13.77□□□□□ -0.2
SYNM-203ENST00000560674 PHKG2P15735 406 aa13.77□□□□□ -0.2
SYNM-203ENST00000560674 MUM1L1Q5H9M0 696 aa13.77□□□□□ -0.2
SYNM-203ENST00000560674 TTBK2Q6IQ55 1244 aa13.77□□□□□ -0.2
SYNM-203ENST00000560674 WDR70Q9NW82 654 aa13.77□□□□□ -0.2
SYNM-203ENST00000560674 MAN1B1Q9UKM7 699 aa13.77□□□□□ -0.2
SYNM-203ENST00000560674 ZMYND10O75800 440 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 AFPP02771 609 aaKnown RBP13.77□□□□□ -0.21
SYNM-203ENST00000560674 SAT1P21673 171 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 ITKQ08881 620 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 C2orf54Q08AI8 447 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 POMGNT1Q8WZA1 660 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 LRGUKQ96M69 825 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.77□□□□□ -0.21
SYNM-203ENST00000560674 GPR108Q9NPR9 543 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 ABCC2Q92887 1545 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 DISP1Q96F81 1524 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 PLEKHG3A1L390 1219 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 SGK1O00141 431 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 PFDN6O15212 129 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 SMIM24O75264 130 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 CYP21A2P08686 494 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 ATP2B4P23634 1241 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 CHRNDQ07001 517 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 POLA2Q14181 598 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 NLRP7Q8WX94 980 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 ANO3Q9BYT9 981 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 RNF14Q9UBS8 474 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 PSMC2P35998 433 aaKnown RBP13.77□□□□□ -0.21
SYNM-203ENST00000560674 CUL4AQ13619 759 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 SLFN13Q68D06 897 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 SMYD4Q8IYR2 804 aaPredicted RBP13.77□□□□□ -0.21
SYNM-203ENST00000560674 TRIM4Q9C037 500 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 CCDC68Q9H2F9 335 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 BAG5Q9UL15 447 aa13.77□□□□□ -0.21
SYNM-203ENST00000560674 CIAO1O76071 339 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 UNC5CLQ8IV45 518 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 DBNLQ9UJU6 430 aaKnown RBP13.76□□□□□ -0.21
SYNM-203ENST00000560674 FAF1Q9UNN5 650 aaPredicted RBP13.76□□□□□ -0.21
SYNM-203ENST00000560674 JRKLQ9Y4A0 524 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 PCDHA1Q9Y5I3 950 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 KDM5DQ9BY66 1539 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 A6NJR5 290 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 PPIP5K2O43314 1243 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 PEX19P40855 299 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 POLGP54098 1239 aaPredicted RBP13.76□□□□□ -0.21
SYNM-203ENST00000560674 RFX6Q8HWS3 928 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 TRIM42Q8IWZ5 723 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 ATP8A1Q9Y2Q0 1164 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 GOLGA8QA0A0J9YX86 632 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 CCDC151A5D8V7 595 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 GOLGA8OA6NCC3 632 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 GOLGA8NF8WBI6 632 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 OATP04181 439 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 ECE1P42892 770 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 PDE1BQ01064 536 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 KIF23Q02241 960 aaPredicted RBP13.76□□□□□ -0.21
SYNM-203ENST00000560674 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 LINC00301Q8NCQ3 95 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 SLC17A8Q8NDX2 589 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 PNMA2Q9UL42 364 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 LRRIQ4A6NIV6 560 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 GPC4O75487 556 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 GAP43P17677 238 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 PHKA1P46020 1223 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 HSP90AA5PQ58FG0 334 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 RSPH3Q86UC2 560 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 PDZD8Q8NEN9 1154 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 TRIM56Q9BRZ2 755 aaKnown RBP13.76□□□□□ -0.21
SYNM-203ENST00000560674 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
SYNM-203ENST00000560674 ECEL1O95672 775 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 SLFN14P0C7P3 912 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 PLTPP55058 493 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 ARHGEF18Q6ZSZ5 1173 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 ARMC9Q7Z3E5 817 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 ZNF653Q96CK0 615 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 RCOR1Q9UKL0 485 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 KDM6BO15054 1643 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 PDE8BO95263 885 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 TTC4O95801 387 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 MAPK4P31152 587 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 RCN2Q14257 317 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 KMT5BQ4FZB7 885 aa13.75□□□□□ -0.21
SYNM-203ENST00000560674 ACRBPQ8NEB7 543 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms