RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 FAM208BQ5VWN6 2430 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 NBNO60934 754 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 AMHP03971 560 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 ZAP70P43403 619 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 NDUFV1P49821 464 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 TCTN1Q2MV58 587 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 DUSP28Q4G0W2 176 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 MYOCDQ8IZQ8 938 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 KANSL2Q9H9L4 492 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 HOMER2Q9NSB8 354 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 COG6Q9Y2V7 657 aa13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 FASNP49327 2511 aaKnown RBP13.69□□□□□ -0.22
KNSTRN-211ENST00000560673 PTPN21Q16825 1174 aa13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 KIAA2013Q8IYS2 634 aa13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 MSLNLQ96KJ4 702 aa13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 RPGRIP1Q96KN7 1286 aa13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 YME1L1Q96TA2 773 aa13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 NUP88Q99567 741 aaPredicted RBP13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 LMAN2LQ9H0V9 348 aa13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 VTA1Q9NP79 307 aa13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 SCN10AQ9Y5Y9 1956 aa13.68□□□□□ -0.22
KNSTRN-211ENST00000560673 MYO5AQ9Y4I1 1855 aaKnown RBP13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 LINC01565O15544 149 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 KPNA6O60684 536 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 ADAM15Q13444 863 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 TMED8Q6PL24 325 aaPredicted RBP13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 TMEM105Q8N8V8 129 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 SMRP1Q8NCR6 262 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 KCNG4Q8TDN1 519 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 DYNLL2Q96FJ2 89 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 PHF7Q9BWX1 381 aaPredicted RBP13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 CRNKL1Q9BZJ0 848 aaKnown RBP13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 ACAD9Q9H845 621 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 SLC38A10Q9HBR0 1119 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 INCENPQ9NQS7 918 aa13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 DDX49Q9Y6V7 483 aaKnown RBP13.67□□□□□ -0.22
KNSTRN-211ENST00000560673 RAD50Q92878 1312 aa13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 GTF2F1P35269 517 aaKnown RBP eCLIP13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 OAZ1P54368 228 aa13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 CHMP4BP1P59074 171 aa13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 OR6J1Q8NGC5 347 aa13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 KIFC2Q96AC6 838 aa13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 RIOK1Q9BRS2 568 aaKnown RBP13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 WDR11Q9BZH6 1224 aa13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 A1CFQ9NQ94 594 aaKnown RBP13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 DLL3Q9NYJ7 618 aa13.66□□□□□ -0.22
KNSTRN-211ENST00000560673 NAV1Q8NEY1 1877 aa13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 MAGEB6P1A0A0J9YX57 407 aa13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 CYP2D6P10635 497 aa13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 CKBP12277 381 aa13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 RBL2Q08999 1139 aa13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 G3BP1Q13283 466 aaKnown RBP eCLIP13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 ZNF512BQ96KM6 892 aaPredicted RBP13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 DBNDD2Q9BQY9 259 aa13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 C11orf84Q9BUA3 381 aaPredicted RBP13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 USP15Q9Y4E8 981 aaPredicted RBP13.65□□□□□ -0.22
KNSTRN-211ENST00000560673 MICAL3Q7RTP6 2002 aa13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 E9PSI1 815 aa13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 LGR5O75473 907 aa13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 LMNAP02545 664 aaKnown RBP13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 RB1P06400 928 aa13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 CTNNB1P35222 781 aa13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 COASYQ13057 564 aa13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 ACAP1Q15027 740 aa13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 DHX38Q92620 1227 aaKnown RBP13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 PPP2R3CQ969Q6 453 aa13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 DCP1AQ9NPI6 582 aaPredicted RBP13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 SETXQ7Z333 2677 aaKnown RBP13.64□□□□□ -0.23
KNSTRN-211ENST00000560673 MYH8P13535 1937 aa13.63□□□□□ -0.23
KNSTRN-211ENST00000560673 C5orf67F2Z3F1 127 aa13.63□□□□□ -0.23
KNSTRN-211ENST00000560673 GRM6O15303 877 aa13.63□□□□□ -0.23
KNSTRN-211ENST00000560673 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
KNSTRN-211ENST00000560673 GDF6Q6KF10 455 aaPredicted RBP13.63□□□□□ -0.23
KNSTRN-211ENST00000560673 CTAGE1Q96RT6 745 aa13.63□□□□□ -0.23
KNSTRN-211ENST00000560673 CLEC1BQ9P126 229 aa13.63□□□□□ -0.23
KNSTRN-211ENST00000560673 PCDHGC5Q9Y5F6 944 aa13.63□□□□□ -0.23
KNSTRN-211ENST00000560673 A6NJR5 290 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 F5H6K3 240 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 UPP2O95045 317 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 CSPG5O95196 566 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 CDK8P49336 464 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 KLRC3Q07444 240 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 MTX1Q13505 466 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 SESTD1Q86VW0 696 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 SDR42E1Q8WUS8 393 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 SSH1Q8WYL5 1049 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 HINFPQ9BQA5 517 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 SEMA4AQ9H3S1 761 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 GPR108Q9NPR9 543 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 RNF146Q9NTX7 359 aa13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 RALYQ9UKM9 306 aaKnown RBP13.62□□□□□ -0.23
KNSTRN-211ENST00000560673 NLRC5Q86WI3 1866 aa13.61□□□□□ -0.23
KNSTRN-211ENST00000560673 NDUFB10O96000 172 aa13.61□□□□□ -0.23
KNSTRN-211ENST00000560673 ATF7P17544 494 aaPredicted RBP13.61□□□□□ -0.23
KNSTRN-211ENST00000560673 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms