RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 CNBD1Q8NA66 436 aa19.7■□□□□ 0.74
TRPM1-211ENST00000560658 SECISBP2LQ93073 1101 aaKnown RBP19.7■□□□□ 0.74
TRPM1-211ENST00000560658 RHOXF2Q9BQY4 288 aa19.7■□□□□ 0.74
TRPM1-211ENST00000560658 PDE11AQ9HCR9 933 aa19.7■□□□□ 0.74
TRPM1-211ENST00000560658 CD209Q9NNX6 404 aa19.7■□□□□ 0.74
TRPM1-211ENST00000560658 MYH8P13535 1937 aa19.7■□□□□ 0.74
TRPM1-211ENST00000560658 RPS6KA5O75582 802 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 IVLP07476 585 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 GCFC2P16383 781 aaKnown RBP19.69■□□□□ 0.74
TRPM1-211ENST00000560658 RFC4P35249 363 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 TECP42680 631 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 ADCY7P51828 1080 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 MCM6Q14566 821 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 DIXDC1Q155Q3 683 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 TRAPPC3LQ5T215 181 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 PPP4R3AQ6IN85 833 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 LARP4BQ92615 738 aaKnown RBP19.69■□□□□ 0.74
TRPM1-211ENST00000560658 MMTAG2Q9BU76 263 aaKnown RBP19.69■□□□□ 0.74
TRPM1-211ENST00000560658 MYH1P12882 1939 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 H3BQF6 201 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 KRT79Q5XKE5 535 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 RPGRQ92834 1020 aaKnown RBP19.69■□□□□ 0.74
TRPM1-211ENST00000560658 ALS2CR12Q96Q35 445 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 NDST4Q9H3R1 872 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 LUC7LQ9NQ29 371 aaKnown RBP19.69■□□□□ 0.74
TRPM1-211ENST00000560658 PODXL2Q9NZ53 605 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 TSKSQ9UJT2 592 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 GGA1Q9UJY5 639 aa19.69■□□□□ 0.74
TRPM1-211ENST00000560658 BBOX1O75936 387 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 GNA14O95837 355 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 ATP1A1P05023 1023 aaKnown RBP19.68■□□□□ 0.74
TRPM1-211ENST00000560658 SNHG28P0DPA3 235 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 GRB10Q13322 594 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 SF3B2Q13435 895 aaKnown RBP19.68■□□□□ 0.74
TRPM1-211ENST00000560658 FAM98CQ17RN3 349 aaKnown RBP19.68■□□□□ 0.74
TRPM1-211ENST00000560658 NCAPH2Q6IBW4 605 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 GOLGA6L1Q8N7Z2 621 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 NOA1Q8NC60 698 aaKnown RBP19.68■□□□□ 0.74
TRPM1-211ENST00000560658 SLC44A5Q8NCS7 719 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 SYN2Q92777 582 aaPredicted RBP19.68■□□□□ 0.74
TRPM1-211ENST00000560658 RBM17Q96I25 401 aaKnown RBP19.68■□□□□ 0.74
TRPM1-211ENST00000560658 AGPAT5Q9NUQ2 364 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 SWAP70Q9UH65 585 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 KDM3AQ9Y4C1 1321 aa19.68■□□□□ 0.74
TRPM1-211ENST00000560658 SSU72P8A0A1W2PR75 194 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 RASSF10A6NK89 507 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 ABL1P00519 1130 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 TCP1P17987 556 aaKnown RBP19.67■□□□□ 0.74
TRPM1-211ENST00000560658 TMEM119Q4V9L6 283 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 LEKR1Q6ZMV7 388 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 MMGT1Q8N4V1 131 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 KIAA0895Q8NCT3 520 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 LRRC15Q8TF66 581 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 RAD54LQ92698 747 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 CEP95Q96GE4 821 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 PIGSQ96S52 555 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 PLIN2Q99541 437 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 RNF14Q9UBS8 474 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 SAP30BPQ9UHR5 308 aaKnown RBP19.67■□□□□ 0.74
TRPM1-211ENST00000560658 SIK3Q9Y2K2 1263 aa19.67■□□□□ 0.74
TRPM1-211ENST00000560658 PJA2O43164 708 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 CLSTN1O94985 981 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 GOLGA8HP0CJ92 632 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 PDHBP11177 359 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 ACTN2P35609 894 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 HNRNPH2P55795 449 aaKnown RBP19.66■□□□□ 0.74
TRPM1-211ENST00000560658 RHBDL3P58872 404 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 CRY2Q49AN0 593 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 MCTP2Q6DN12 878 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 USP17L2Q6R6M4 530 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 RNF10Q8N5U6 811 aaKnown RBP19.66■□□□□ 0.74
TRPM1-211ENST00000560658 CAGE1Q8TC20 777 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 NT5C3AQ9H0P0 336 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 SEMA6BQ9H3T3 888 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 BMP2KQ9NSY1 1161 aaPredicted RBP19.66■□□□□ 0.74
TRPM1-211ENST00000560658 BLOC1S4Q9NUP1 217 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 JAG2Q9Y219 1238 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 BTAF1O14981 1849 aa19.66■□□□□ 0.74
TRPM1-211ENST00000560658 IDEP14735 1019 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 HMGB2P26583 209 aaKnown RBP19.65■□□□□ 0.74
TRPM1-211ENST00000560658 ST5P78524 1137 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 MAPK8IP2Q13387 824 aaPredicted RBP19.65■□□□□ 0.74
TRPM1-211ENST00000560658 CEP63Q96MT8 703 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 ZCCHC17Q9NP64 241 aaKnown RBP19.65■□□□□ 0.74
TRPM1-211ENST00000560658 MTMR4Q9NYA4 1195 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 VPS18Q9P253 973 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 SNX12Q9UMY4 172 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 PNMA6FA0A0J9YX94 578 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 UFL1O94874 794 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 FCER1AP12319 257 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 TXKP42681 527 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 MRPL12P52815 198 aaKnown RBP19.65■□□□□ 0.74
TRPM1-211ENST00000560658 EHHADHQ08426 723 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 ZSCAN26Q16670 478 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 HYIQ5T013 277 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 PNMA5Q96PV4 448 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 MMS19Q96T76 1030 aa19.65■□□□□ 0.74
TRPM1-211ENST00000560658 IFIH1Q9BYX4 1025 aaKnown RBP19.65■□□□□ 0.74
TRPM1-211ENST00000560658 SH2D4AQ9H788 454 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms