RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 ALG2Q9H553 416 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 GINM1Q9NU53 330 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 CLEC1BQ9P126 229 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 TEP1Q99973 2627 aaKnown RBP8.03□□□□□ -1.12
HERC1-208ENST00000560462 HECTD1Q9ULT8 2610 aa8.03□□□□□ -1.12
HERC1-208ENST00000560462 ANKRD17O75179 2603 aaKnown RBP8.02□□□□□ -1.12
HERC1-208ENST00000560462 MYO18BQ8IUG5 2567 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.02□□□□□ -1.13
HERC1-208ENST00000560462 PI4KAP2A4QPH2 592 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 EIF4E1BA6NMX2 242 aaKnown RBP8.02□□□□□ -1.13
HERC1-208ENST00000560462 TRIM6-TRIM34B2RNG4 842 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 CHL1O00533 1208 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 FDX1P10109 184 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 GCGRP47871 477 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 USP14P54578 494 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 PSMC6P62333 389 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 SHROOM1Q2M3G4 852 aaPredicted RBP8.02□□□□□ -1.13
HERC1-208ENST00000560462 N4BP2L1Q5TBK1 243 aaPredicted RBP8.02□□□□□ -1.13
HERC1-208ENST00000560462 DUSP27Q5VZP5 1158 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 KSR2Q6VAB6 950 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 FBXO11Q86XK2 927 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 TMEM192Q8IY95 271 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 MSL3Q8N5Y2 521 aaKnown RBP8.02□□□□□ -1.13
HERC1-208ENST00000560462 PI4KAP1Q8N8J0 262 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 RDH13Q8NBN7 331 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 NETO1Q8TDF5 533 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 DDX1Q92499 740 aaKnown RBP8.02□□□□□ -1.13
HERC1-208ENST00000560462 PLEKHF1Q96S99 279 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 MMP19Q99542 508 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 TRIM34Q9BYJ4 488 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 RPAP3Q9H6T3 665 aaPredicted RBP8.02□□□□□ -1.13
HERC1-208ENST00000560462 ZBTB21Q9ULJ3 1066 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 MROH5Q6ZUA9 1318 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 MAPK8IP3Q9UPT6 1336 aa8.02□□□□□ -1.13
HERC1-208ENST00000560462 ABHD14A-ACY1A0A1B0GW23 586 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 PER1O15534 1290 aaPredicted RBP8.01□□□□□ -1.13
HERC1-208ENST00000560462 GDF11O95390 407 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 SNAI1O95863 264 aaPredicted RBP8.01□□□□□ -1.13
HERC1-208ENST00000560462 NKX3-2P78367 333 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 FOXO4P98177 505 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 COG2Q14746 738 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 CCDC144BQ3MJ40 725 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 ARSIQ5FYB1 569 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 CNKSR3Q6P9H4 555 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 MB21D1Q8N884 522 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.01□□□□□ -1.13
HERC1-208ENST00000560462 SMOC2Q9H3U7 446 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 HOXC10Q9NYD6 342 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 LAS1LQ9Y4W2 734 aaKnown RBP8.01□□□□□ -1.13
HERC1-208ENST00000560462 DMXL2Q8TDJ6 3036 aa8.01□□□□□ -1.13
HERC1-208ENST00000560462 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
HERC1-208ENST00000560462 ZEB2O60315 1214 aa8□□□□□ -1.13
HERC1-208ENST00000560462 EFCAB14O75071 495 aa8□□□□□ -1.13
HERC1-208ENST00000560462 KRT38O76015 456 aa8□□□□□ -1.13
HERC1-208ENST00000560462 SP9P0CG40 484 aa8□□□□□ -1.13
HERC1-208ENST00000560462 ARP10275 920 aa8□□□□□ -1.13
HERC1-208ENST00000560462 BTDP43251 543 aa8□□□□□ -1.13
HERC1-208ENST00000560462 ACVR2BQ13705 512 aa8□□□□□ -1.13
HERC1-208ENST00000560462 LRRFIP1Q32MZ4 808 aaKnown RBP8□□□□□ -1.13
HERC1-208ENST00000560462 LMBR1LQ6UX01 489 aa8□□□□□ -1.13
HERC1-208ENST00000560462 PIK3R5Q8WYR1 880 aa8□□□□□ -1.13
HERC1-208ENST00000560462 PPP2R3CQ969Q6 453 aa8□□□□□ -1.13
HERC1-208ENST00000560462 LMAN2LQ9H0V9 348 aa8□□□□□ -1.13
HERC1-208ENST00000560462 PALM3A6NDB9 673 aaPredicted RBP7.99□□□□□ -1.13
HERC1-208ENST00000560462 C3orf80F5H4A9 247 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 ATG7O95352 703 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 SLC25A27O95847 323 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 NPR3P17342 541 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 RFX1P22670 979 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 SP100P23497 879 aaPredicted RBP7.99□□□□□ -1.13
HERC1-208ENST00000560462 RIPK4P57078 832 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 HTRA4P83105 476 aaPredicted RBP7.99□□□□□ -1.13
HERC1-208ENST00000560462 CTDSPL2Q05D32 466 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 BFSP2Q13515 415 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 FSCN1Q16658 493 aaKnown RBP7.99□□□□□ -1.13
HERC1-208ENST00000560462 LARP1BQ659C4 914 aaKnown RBP7.99□□□□□ -1.13
HERC1-208ENST00000560462 SLF2Q8IX21 1173 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 EFHBQ8N7U6 833 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 SUSD6Q92537 303 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 PUS3Q9BZE2 481 aaKnown RBP7.99□□□□□ -1.13
HERC1-208ENST00000560462 KIAA1683Q9H0B3 1180 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 MYH16Q9H6N6 1097 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 PI4KBQ9UBF8 816 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 BARX2Q9UMQ3 279 aaPredicted RBP7.99□□□□□ -1.13
HERC1-208ENST00000560462 MYO7AQ13402 2215 aa7.99□□□□□ -1.13
HERC1-208ENST00000560462 PTPN13Q12923 2485 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 TANC1Q9C0D5 1861 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.98□□□□□ -1.13
HERC1-208ENST00000560462 GRM6O15303 877 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 CSPG5O95196 566 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 SMPD1P17405 629 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 TGM1P22735 817 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 LMOD3Q0VAK6 560 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 IKBKEQ14164 716 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 MAMDC4Q6UXC1 1216 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 NOL8Q76FK4 1167 aaKnown RBP7.98□□□□□ -1.13
HERC1-208ENST00000560462 DZIP1Q86YF9 867 aaKnown RBP7.98□□□□□ -1.13
HERC1-208ENST00000560462 TMEFF1Q8IYR6 380 aa7.98□□□□□ -1.13
HERC1-208ENST00000560462 C11orf84Q9BUA3 381 aaPredicted RBP7.98□□□□□ -1.13
HERC1-208ENST00000560462 TANGO6Q9C0B7 1094 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms