RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TATDN1Q6P1N9 297 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 TMEM179Q6ZVK1 233 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 HOMER1Q86YM7 354 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 TMTC1Q8IUR5 882 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 KCTD17Q8N5Z5 321 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 RETREG2Q8NC44 543 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 GMCL1P1Q8NEA9 526 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 NUP58Q9BVL2 599 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 TRIM9Q9C026 710 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 BLZF1Q9H2G9 400 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 EXOC1Q9NV70 894 aa10.89□□□□□ -0.67
RTF1-206ENST00000560447 N4BP3O15049 544 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 ECE2O60344 883 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 FGFR1OPO95684 399 aaKnown RBP10.88□□□□□ -0.67
RTF1-206ENST00000560447 NUDT7P0C024 238 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 PRKCSHP14314 528 aaPredicted RBP10.88□□□□□ -0.67
RTF1-206ENST00000560447 PRCPP42785 496 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 DNM2P50570 870 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 USP11P51784 963 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 TUBB4BP68371 445 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 CCDC93Q567U6 631 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 HYIQ5T013 277 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 TRIM65Q6PJ69 517 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 SV2BQ7L1I2 683 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 ADGRF4Q8IZF3 695 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 LRRC47Q8N1G4 583 aaKnown RBP10.88□□□□□ -0.67
RTF1-206ENST00000560447 PTCD2Q8WV60 388 aaKnown RBP10.88□□□□□ -0.67
RTF1-206ENST00000560447 ZNF592Q92610 1267 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 MBOAT7Q96N66 472 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 FEZ1Q99689 392 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 TRIM34Q9BYJ4 488 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 UBA5Q9GZZ9 404 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 NT5C3AQ9H0P0 336 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 MYO1AQ9UBC5 1043 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 MAGEC2Q9UBF1 373 aaPredicted RBP10.88□□□□□ -0.67
RTF1-206ENST00000560447 LRWD1Q9UFC0 647 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 DNAI1Q9UI46 699 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 KIF13BQ9NQT8 1826 aa10.88□□□□□ -0.67
RTF1-206ENST00000560447 CYP3A7-CYP3A51PA0A087WV96 503 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 LGALS16A8MUM7 142 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 TBX3O15119 743 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 FOSP01100 380 aaPredicted RBP10.87□□□□□ -0.67
RTF1-206ENST00000560447 CYP3A7P24462 503 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 CASP1P29466 404 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 MMP14P50281 582 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 STX17P56962 302 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 RBM10P98175 930 aaKnown RBP10.87□□□□□ -0.67
RTF1-206ENST00000560447 NCBP1Q09161 790 aaKnown RBP10.87□□□□□ -0.67
RTF1-206ENST00000560447 CERKLQ49MI3 558 aaPredicted RBP10.87□□□□□ -0.67
RTF1-206ENST00000560447 TMEM119Q4V9L6 283 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 FIGNQ5HY92 759 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 JAKMIP3Q5VZ66 844 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 KRT79Q5XKE5 535 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 TTI2Q6NXR4 508 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 ARHGAP27Q6ZUM4 889 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 UNC13DQ70J99 1090 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 RASGRP2Q7LDG7 609 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 P2RX5Q93086 422 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 ZNF622Q969S3 477 aaKnown RBP eCLIP10.87□□□□□ -0.675e-7■□□□□ 10.7
RTF1-206ENST00000560447 CDK5RAP3Q96JB5 506 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 MMTAG2Q9BU76 263 aaKnown RBP10.87□□□□□ -0.67
RTF1-206ENST00000560447 CCDC94Q9BW85 323 aaPredicted RBP10.87□□□□□ -0.67
RTF1-206ENST00000560447 VAT1LQ9HCJ6 419 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
RTF1-206ENST00000560447 HERC5Q9UII4 1024 aaKnown RBP10.87□□□□□ -0.67
RTF1-206ENST00000560447 MTMR7Q9Y216 660 aa10.87□□□□□ -0.67
RTF1-206ENST00000560447 FRMPD2Q68DX3 1309 aaPredicted RBP10.86□□□□□ -0.67
RTF1-206ENST00000560447 LOXHD1Q8IVV2 1947 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 F8W031 263 aaPredicted RBP10.86□□□□□ -0.67
RTF1-206ENST00000560447 TEX33O43247 280 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 SCNN1DP51172 638 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 ASIC1P78348 528 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 RBL2Q08999 1139 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 DSG2Q14126 1118 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 CCDC96Q2M329 555 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 FKBP1CQ5VVH2 108 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 BTNL9Q6UXG8 535 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 CYP26C1Q6V0L0 522 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 SYT10Q6XYQ8 523 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 PLPP6Q8IY26 295 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 SLFN12Q8IYM2 578 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 SMYD4Q8IYR2 804 aaPredicted RBP10.86□□□□□ -0.67
RTF1-206ENST00000560447 GUF1Q8N442 669 aaKnown RBP10.86□□□□□ -0.67
RTF1-206ENST00000560447 C7orf43Q8WVR3 580 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 LARP4BQ92615 738 aaKnown RBP10.86□□□□□ -0.67
RTF1-206ENST00000560447 STAMQ92783 540 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 TRIM47Q96LD4 638 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 GPCPD1Q9NPB8 672 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 FAM198AQ9UFP1 575 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 GDAQ9Y2T3 454 aa10.86□□□□□ -0.67
RTF1-206ENST00000560447 PP2D1A8MPX8 630 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 MPHOSPH10O00566 681 aaKnown RBP10.85□□□□□ -0.67
RTF1-206ENST00000560447 KIF20AO95235 890 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 GYPCP04921 128 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 TECP42680 631 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 ADKP55263 362 aaKnown RBP10.85□□□□□ -0.67
RTF1-206ENST00000560447 LRRC63Q05C16 580 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 PDE4DQ08499 809 aa10.85□□□□□ -0.67
RTF1-206ENST00000560447 GRB10Q13322 594 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms