RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 CLDND1Q9NY35 253 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
APH1B-208ENST00000560353 SURF6O75683 361 aaKnown RBP12.33□□□□□ -0.44
APH1B-208ENST00000560353 SELPP16109 830 aa12.33□□□□□ -0.44
APH1B-208ENST00000560353 IKBKEQ14164 716 aa12.33□□□□□ -0.44
APH1B-208ENST00000560353 TCEAL5Q5H9L2 206 aa12.33□□□□□ -0.44
APH1B-208ENST00000560353 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
APH1B-208ENST00000560353 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
APH1B-208ENST00000560353 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
APH1B-208ENST00000560353 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
APH1B-208ENST00000560353 NYAP2Q9P242 653 aa12.33□□□□□ -0.44
APH1B-208ENST00000560353 ZNF532Q9HCE3 1301 aa12.33□□□□□ -0.44
APH1B-208ENST00000560353 TECTAO75443 2155 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 PROB1E7EW31 1015 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 CXCL10P02778 98 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 CT47B1P0C2W7 299 aaPredicted RBP12.32□□□□□ -0.44
APH1B-208ENST00000560353 SLFN5Q08AF3 891 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 GPNMBQ14956 572 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 PTGISQ16647 500 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 EPC2Q52LR7 807 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 WDR11Q9BZH6 1224 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 NSUN3Q9H649 340 aaKnown RBP12.32□□□□□ -0.44
APH1B-208ENST00000560353 ARMT1Q9H993 441 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 RNF146Q9NTX7 359 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 RAD50Q92878 1312 aa12.32□□□□□ -0.44
APH1B-208ENST00000560353 DCHS1Q96JQ0 3298 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 H3BNC9 293 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 PRKAB2O43741 272 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 LTBRP36941 435 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 GPM6BQ13491 265 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 LRRC8DQ7L1W4 858 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 OR6J1Q8NGC5 347 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 SSH3Q8TE77 659 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 ALG13Q9NP73 1137 aaKnown RBP12.31□□□□□ -0.44
APH1B-208ENST00000560353 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
APH1B-208ENST00000560353 MYO15AQ9UKN7 3530 aa12.31□□□□□ -0.44
APH1B-208ENST00000560353 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
APH1B-208ENST00000560353 STXBP3O00186 592 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 SNPHO15079 494 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 MBTPS2O43462 519 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 ZXDAP98168 799 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 CTC1Q2NKJ3 1217 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 RPAINQ86UA6 219 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
APH1B-208ENST00000560353 FAM9BQ8IZU0 186 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 TET1Q8NFU7 2136 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 PPP1R13LQ8WUF5 828 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 TRERF1Q96PN7 1200 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 CYP39A1Q9NYL5 469 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 CLIP2Q9UDT6 1046 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 SYNPO2Q9UMS6 1093 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 NOP58Q9Y2X3 529 aaKnown RBP12.3□□□□□ -0.44
APH1B-208ENST00000560353 SIP14410 1827 aa12.3□□□□□ -0.44
APH1B-208ENST00000560353 TANC1Q9C0D5 1861 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 RBM47A0AV96 593 aaKnown RBP12.29□□□□□ -0.44
APH1B-208ENST00000560353 A6NJR5 290 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 NBNO60934 754 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 MBD4O95243 580 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 AMHP03971 560 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 ID4P47928 161 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 HTRA4P83105 476 aaPredicted RBP12.29□□□□□ -0.44
APH1B-208ENST00000560353 ATP8B2P98198 1209 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 SMAD4Q13485 552 aaKnown RBP12.29□□□□□ -0.44
APH1B-208ENST00000560353 CLUL1Q15846 466 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 MKL1Q969V6 931 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 ADD3Q9UEY8 706 aaKnown RBP12.29□□□□□ -0.44
APH1B-208ENST00000560353 MYH8P13535 1937 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 PTPRSQ13332 1948 aa12.29□□□□□ -0.44
APH1B-208ENST00000560353 LOC102724159A0A0B4J2E5 919 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 NKRFO15226 690 aaKnown RBP eCLIP12.28□□□□□ -0.44
APH1B-208ENST00000560353 BCAR3O75815 825 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 BMP3P12645 472 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 ALAS1P13196 640 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 AVPR2P30518 371 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 RBL2Q08999 1139 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 PWP2Q15269 919 aaKnown RBP12.28□□□□□ -0.44
APH1B-208ENST00000560353 TCTN1Q2MV58 587 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 ASCL5Q7RTU5 278 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 TMEM192Q8IY95 271 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 LRRC47Q8N1G4 583 aaKnown RBP12.28□□□□□ -0.44
APH1B-208ENST00000560353 GMCL1P1Q8NEA9 526 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 CHURC1Q8WUH1 139 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 MKNK2Q9HBH9 465 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 EPG5Q9HCE0 2579 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 VPS13AQ96RL7 3174 aa12.28□□□□□ -0.44
APH1B-208ENST00000560353 TMEM232C9JQI7 657 aa12.27□□□□□ -0.45
APH1B-208ENST00000560353 H0Y858 1186 aa12.27□□□□□ -0.45
APH1B-208ENST00000560353 GOLIM4O00461 696 aa12.27□□□□□ -0.45
APH1B-208ENST00000560353 CKBP12277 381 aa12.27□□□□□ -0.45
APH1B-208ENST00000560353 STAT2P52630 851 aa12.27□□□□□ -0.45
APH1B-208ENST00000560353 VCPP55072 806 aaKnown RBP12.27□□□□□ -0.45
APH1B-208ENST00000560353 SIGLEC14Q08ET2 396 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms