RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 MCM3APO60318 1980 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 KIAA1217Q5T5P2 1943 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 WNT7AO00755 349 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 CCNT1O60563 726 aaKnown RBP11.88□□□□□ -0.51
TPM1-221ENST00000559831 EIF2AK2P19525 551 aaKnown RBP11.88□□□□□ -0.51
TPM1-221ENST00000559831 MCM7P33993 719 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 TRAPPC10P48553 1259 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 GHRHRQ02643 423 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 KCTD2Q14681 263 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 SF3A1Q15459 793 aaKnown RBP11.88□□□□□ -0.51
TPM1-221ENST00000559831 TPRNQ4KMQ1 711 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 ARHGEF16Q5VV41 709 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 ATL3Q6DD88 541 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 C17orf99Q6UX52 265 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 IVNS1ABPQ9Y6Y0 642 aa11.88□□□□□ -0.51
TPM1-221ENST00000559831 POTEB2H3BUK9 544 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 TRPA1O75762 1119 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 TBC1D8O95759 1140 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 PGK2P07205 417 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 FCER1AP12319 257 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 MAPK4P31152 587 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 ZNF76P36508 570 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 SREBF1P36956 1147 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 ARHGAP4P98171 946 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 GPR142Q7Z601 462 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 PLEKHH3Q7Z736 793 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 RMDN3Q96TC7 470 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 PXMP2Q9NR77 195 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 CEP131Q9UPN4 1083 aa11.87□□□□□ -0.51
TPM1-221ENST00000559831 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 LRRC37A2A6NM11 1700 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 ZNF236Q9UL36 1845 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 TDP2O95551 362 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 MYCLP12524 364 aaPredicted RBP11.86□□□□□ -0.51
TPM1-221ENST00000559831 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
TPM1-221ENST00000559831 USP11P51784 963 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 CNTN2Q02246 1040 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 CSPP1Q1MSJ5 1256 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 CLEC17AQ6ZS10 378 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.86□□□□□ -0.51
TPM1-221ENST00000559831 IL31RAQ8NI17 732 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
TPM1-221ENST00000559831 ZFP91Q96JP5 570 aaPredicted RBP11.86□□□□□ -0.51
TPM1-221ENST00000559831 NAP1L4Q99733 375 aaKnown RBP11.86□□□□□ -0.51
TPM1-221ENST00000559831 SCAND2PQ9GZW5 306 aaPredicted RBP11.86□□□□□ -0.51
TPM1-221ENST00000559831 MAF1Q9H063 256 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.86□□□□□ -0.51
TPM1-221ENST00000559831 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 RNF186Q9NXI6 227 aa11.86□□□□□ -0.51
TPM1-221ENST00000559831 SPTLC2O15270 562 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 EDIL3O43854 480 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 NEMFO60524 1076 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 YEATS4O95619 227 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 PTPREP23469 700 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 ADORA2AP29274 412 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 MARCKSP29966 332 aaPredicted RBP11.85□□□□□ -0.51
TPM1-221ENST00000559831 CCND2P30279 289 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 PGM5Q15124 567 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 POTEDQ86YR6 584 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 LINC00301Q8NCQ3 95 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 NSUN6Q8TEA1 469 aaKnown RBP11.85□□□□□ -0.51
TPM1-221ENST00000559831 PDCD2LQ9BRP1 358 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 DDX25Q9UHL0 483 aaKnown RBP11.85□□□□□ -0.51
TPM1-221ENST00000559831 MRVI1Q9Y6F6 885 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 FRMPD4Q14CM0 1322 aa11.85□□□□□ -0.51
TPM1-221ENST00000559831 SOWAHBA6NEL2 793 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 SLC15A5A6NIM6 579 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 TNPO2O14787 897 aaKnown RBP11.84□□□□□ -0.51
TPM1-221ENST00000559831 STRNO43815 780 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 SLC37A4O43826 429 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 MARCH6O60337 910 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 PRPF40AO75400 957 aaKnown RBP11.84□□□□□ -0.51
TPM1-221ENST00000559831 BMP15O95972 392 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 CYP3A4P08684 503 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 GCFC2P16383 781 aaKnown RBP11.84□□□□□ -0.51
TPM1-221ENST00000559831 KCNA4P22459 653 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 MCM4P33991 863 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 ME1P48163 572 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 ALDH5A1P51649 535 aaPredicted RBP11.84□□□□□ -0.51
TPM1-221ENST00000559831 PTGDRQ13258 359 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 SLC39A14Q15043 492 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 PTPAQ15257 358 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 PRR16Q569H4 304 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 PCNX4Q63HM2 1172 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 DPP9Q86TI2 863 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 FAM133AQ8N9E0 248 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 DNERQ8NFT8 737 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 KCNG4Q8TDN1 519 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 CRYGNQ8WXF5 182 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 UIMC1Q96RL1 719 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 ADD3Q9UEY8 706 aaKnown RBP11.84□□□□□ -0.51
TPM1-221ENST00000559831 RCOR1Q9UKL0 485 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
TPM1-221ENST00000559831 DOCK5Q9H7D0 1870 aa11.84□□□□□ -0.51
TPM1-221ENST00000559831 DNAJC25-GNG10A0A024R161 153 aa11.83□□□□□ -0.52
TPM1-221ENST00000559831 CYP3A7-CYP3A51PA0A087WV96 503 aa11.83□□□□□ -0.52
TPM1-221ENST00000559831 DDX11L8A8MPP1 907 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms