RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PIK3CDO00329 1044 aa23.34■■□□□ 1.33
TSPAN3-207ENST00000559494 SEPT4O43236 478 aa23.34■■□□□ 1.33
TSPAN3-207ENST00000559494 EEPD1Q7L9B9 569 aa23.34■■□□□ 1.33
TSPAN3-207ENST00000559494 TRIM22Q8IYM9 498 aa23.34■■□□□ 1.33
TSPAN3-207ENST00000559494 SHISA4Q96DD7 197 aa23.34■■□□□ 1.33
TSPAN3-207ENST00000559494 CRISPLD2Q9H0B8 497 aa23.34■■□□□ 1.33
TSPAN3-207ENST00000559494 PXMP2Q9NR77 195 aa23.34■■□□□ 1.33
TSPAN3-207ENST00000559494 DDX20Q9UHI6 824 aaKnown RBP23.34■■□□□ 1.33
TSPAN3-207ENST00000559494 ZHX1Q9UKY1 873 aaPredicted RBP23.34■■□□□ 1.33
TSPAN3-207ENST00000559494 SMCO2A6NFE2 343 aa23.33■■□□□ 1.33
TSPAN3-207ENST00000559494 EIF2AK2P19525 551 aaKnown RBP23.33■■□□□ 1.33
TSPAN3-207ENST00000559494 ARHGEF16Q5VV41 709 aa23.33■■□□□ 1.33
TSPAN3-207ENST00000559494 PPP1R18Q6NYC8 613 aa23.33■■□□□ 1.33
TSPAN3-207ENST00000559494 SMARCC2Q8TAQ2 1214 aa23.33■■□□□ 1.33
TSPAN3-207ENST00000559494 CUL5Q93034 780 aa23.33■■□□□ 1.33
TSPAN3-207ENST00000559494 ZSCAN31Q96LW9 406 aaPredicted RBP23.33■■□□□ 1.33
TSPAN3-207ENST00000559494 IWS1Q96ST2 819 aa23.33■■□□□ 1.33
TSPAN3-207ENST00000559494 RIC8AQ9NPQ8 531 aa23.33■■□□□ 1.33
TSPAN3-207ENST00000559494 ST18O60284 1047 aa23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 CDKL5O76039 1030 aa23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 CD2BP2O95400 341 aaKnown RBP23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 PDE4DQ08499 809 aa23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 UBE2SQ16763 222 aa23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 ANO1Q5XXA6 986 aa23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 TAPT1Q6NXT6 567 aa23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 IL27Q8NEV9 243 aa23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 AIFM3Q96NN9 605 aa23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 PDGFCQ9NRA1 345 aa23.33■■□□□ 1.32
TSPAN3-207ENST00000559494 B4DLN1 442 aa23.32■■□□□ 1.32
TSPAN3-207ENST00000559494 DEXIO95424 95 aa23.32■■□□□ 1.32
TSPAN3-207ENST00000559494 TFRCP02786 760 aaKnown RBP23.32■■□□□ 1.32
TSPAN3-207ENST00000559494 NR3C2P08235 984 aa23.32■■□□□ 1.32
TSPAN3-207ENST00000559494 MRPL12P52815 198 aaKnown RBP23.32■■□□□ 1.32
TSPAN3-207ENST00000559494 CCDC144BQ3MJ40 725 aa23.32■■□□□ 1.32
TSPAN3-207ENST00000559494 FBXO16Q8IX29 292 aaPredicted RBP23.32■■□□□ 1.32
TSPAN3-207ENST00000559494 PDCD2LQ9BRP1 358 aa23.32■■□□□ 1.32
TSPAN3-207ENST00000559494 FAM184BQ9ULE4 1060 aa23.32■■□□□ 1.32
TSPAN3-207ENST00000559494 ADAMTS3O15072 1205 aa23.31■■□□□ 1.32
TSPAN3-207ENST00000559494 FDPSP14324 419 aaKnown RBP23.31■■□□□ 1.32
TSPAN3-207ENST00000559494 ADCY7P51828 1080 aa23.31■■□□□ 1.32
TSPAN3-207ENST00000559494 NSUN7Q8NE18 718 aaKnown RBP23.31■■□□□ 1.32
TSPAN3-207ENST00000559494 MPHOSPH6Q99547 160 aaKnown RBP23.31■■□□□ 1.32
TSPAN3-207ENST00000559494 VTA1Q9NP79 307 aa23.31■■□□□ 1.32
TSPAN3-207ENST00000559494 VPS54Q9P1Q0 977 aa23.31■■□□□ 1.32
TSPAN3-207ENST00000559494 OGDHLQ9ULD0 1010 aa23.31■■□□□ 1.32
TSPAN3-207ENST00000559494 ADCY6O43306 1168 aa23.3■■□□□ 1.32
TSPAN3-207ENST00000559494 MSCO60682 206 aa23.3■■□□□ 1.32
TSPAN3-207ENST00000559494 AKR1A1P14550 325 aa23.3■■□□□ 1.32
TSPAN3-207ENST00000559494 PGM5Q15124 567 aa23.3■■□□□ 1.32
TSPAN3-207ENST00000559494 CCDC83Q8IWF9 413 aa23.3■■□□□ 1.32
TSPAN3-207ENST00000559494 IL31RAQ8NI17 732 aa23.3■■□□□ 1.32
TSPAN3-207ENST00000559494 ZMYND12Q9H0C1 365 aa23.3■■□□□ 1.32
TSPAN3-207ENST00000559494 SH2B1Q9NRF2 756 aaPredicted RBP23.3■■□□□ 1.32
TSPAN3-207ENST00000559494 ORC3Q9UBD5 711 aaPredicted RBP23.3■■□□□ 1.32
TSPAN3-207ENST00000559494 STK36Q9NRP7 1315 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 ESYT2A0FGR8 921 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 JAK2O60674 1132 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 ADCYAP1R1P41586 468 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 STXBP2Q15833 593 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 TMEM63BQ5T3F8 832 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 VSIG10LQ86VR7 867 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 CCDC12Q8WUD4 166 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 LENG1Q96BZ8 264 aaPredicted RBP23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 SH3GLB2Q9NR46 395 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 PCDHA6Q9UN73 950 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 PCDHA8Q9Y5H6 950 aa23.29■■□□□ 1.32
TSPAN3-207ENST00000559494 FRMPD4Q14CM0 1322 aa23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 RBM47A0AV96 593 aaKnown RBP23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 MYCLP12524 364 aaPredicted RBP23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 CLK2P49760 499 aaKnown RBP23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 IQSEC1Q6DN90 963 aa23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 TEX2Q8IWB9 1127 aa23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 ZFP91Q96JP5 570 aaPredicted RBP23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 GLT8D2Q9H1C3 349 aa23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 C6orf50Q9HD87 102 aa23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 TMEM260Q9NX78 707 aa23.28■■□□□ 1.32
TSPAN3-207ENST00000559494 EIF3JO75822 258 aaKnown RBP23.27■■□□□ 1.32
TSPAN3-207ENST00000559494 RARBP10826 455 aa23.27■■□□□ 1.32
TSPAN3-207ENST00000559494 CAPN2P17655 700 aa23.27■■□□□ 1.32
TSPAN3-207ENST00000559494 MNX1P50219 401 aaPredicted RBP23.27■■□□□ 1.32
TSPAN3-207ENST00000559494 TNFAIP2Q03169 654 aa23.27■■□□□ 1.32
TSPAN3-207ENST00000559494 LRRC37A2A6NM11 1700 aa23.26■■□□□ 1.31
TSPAN3-207ENST00000559494 MKI67P46013 3256 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-207ENST00000559494 DUSP11O75319 330 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-207ENST00000559494 SMPD1P17405 629 aa23.26■■□□□ 1.31
TSPAN3-207ENST00000559494 PTGS1P23219 599 aa23.26■■□□□ 1.31
TSPAN3-207ENST00000559494 RGS19P49795 217 aa23.26■■□□□ 1.31
TSPAN3-207ENST00000559494 MRPS9P82933 396 aaKnown RBP23.26■■□□□ 1.31
TSPAN3-207ENST00000559494 CCDC148Q8NFR7 591 aa23.26■■□□□ 1.31
TSPAN3-207ENST00000559494 TMX3Q96JJ7 454 aa23.26■■□□□ 1.31
TSPAN3-207ENST00000559494 SPDYE3A6NKU9 549 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 RGS20O76081 388 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 FOSP01100 380 aaPredicted RBP23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 GNA11P29992 359 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 CCND2P30279 289 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 MCM2P49736 904 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 NLRP5P59047 1200 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 JAKMIP3Q5VZ66 844 aa23.25■■□□□ 1.31
TSPAN3-207ENST00000559494 SEPT14Q6ZU15 432 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 331.7 ms