RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MOB2Q70IA6 237 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 PPP1R16BQ96T49 567 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 GMLQ99445 158 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 PSME4Q14997 1843 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 THSD7BQ9C0I4 1608 aa9.23□□□□□ -0.93
SPG11-213ENST00000558988 INHBBP09529 407 aa9.22□□□□□ -0.93
SPG11-213ENST00000558988 NOGQ13253 232 aa9.22□□□□□ -0.93
SPG11-213ENST00000558988 STRIP1Q5VSL9 837 aa9.22□□□□□ -0.93
SPG11-213ENST00000558988 LDHAL6AQ6ZMR3 332 aa9.22□□□□□ -0.93
SPG11-213ENST00000558988 SUCLG2Q96I99 432 aa9.22□□□□□ -0.93
SPG11-213ENST00000558988 HHIPL1Q96JK4 782 aa9.22□□□□□ -0.93
SPG11-213ENST00000558988 FAM53CQ9NYF3 392 aa9.22□□□□□ -0.93
SPG11-213ENST00000558988 HDAC9Q9UKV0 1011 aa9.22□□□□□ -0.93
SPG11-213ENST00000558988 A6NJR5 290 aa9.21□□□□□ -0.94
SPG11-213ENST00000558988 UBE2Q2LH0YL09 131 aa9.21□□□□□ -0.94
SPG11-213ENST00000558988 ALDH1L1O75891 902 aa9.21□□□□□ -0.94
SPG11-213ENST00000558988 RBM5P52756 815 aaKnown RBP eCLIP9.21□□□□□ -0.94
SPG11-213ENST00000558988 KIF23Q02241 960 aaPredicted RBP9.21□□□□□ -0.94
SPG11-213ENST00000558988 ZNF804AQ7Z570 1209 aa9.21□□□□□ -0.94
SPG11-213ENST00000558988 ABHD8Q96I13 439 aa9.21□□□□□ -0.94
SPG11-213ENST00000558988 PUS3Q9BZE2 481 aaKnown RBP9.21□□□□□ -0.94
SPG11-213ENST00000558988 CD209Q9NNX6 404 aa9.21□□□□□ -0.94
SPG11-213ENST00000558988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.21□□□□□ -0.94
SPG11-213ENST00000558988 MYO3BQ8WXR4 1341 aa9.21□□□□□ -0.94
SPG11-213ENST00000558988 CASP8AP2Q9UKL3 1982 aa9.21□□□□□ -0.94
SPG11-213ENST00000558988 CCDC85CA6NKD9 419 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 SOX1O00570 391 aaPredicted RBP9.2□□□□□ -0.94
SPG11-213ENST00000558988 WNT10BO00744 389 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 TRPA1O75762 1119 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 NBPF7P0C2Y1 421 aaPredicted RBP9.2□□□□□ -0.94
SPG11-213ENST00000558988 ACPPP15309 386 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 NF2P35240 595 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 CD96P40200 585 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 PTK7Q13308 1070 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 DLGAP5Q15398 846 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 ZSWIM9Q86XI8 627 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 SSH1Q8WYL5 1049 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 PIK3R5Q8WYR1 880 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 ABI2Q9NYB9 513 aaPredicted RBP9.2□□□□□ -0.94
SPG11-213ENST00000558988 SOX13Q9UN79 622 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 PCDHAC2Q9Y5I4 1007 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 ZNF521Q96K83 1311 aa9.2□□□□□ -0.94
SPG11-213ENST00000558988 A0A1B0GUL6 1792 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 CLRN2A0PK11 232 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 FAM155AB1AL88 458 aaPredicted RBP9.19□□□□□ -0.94
SPG11-213ENST00000558988 E9PSI1 815 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 CA12O43570 354 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 RAB6AP20340 208 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 GYG1P46976 350 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 CHAF1AQ13111 956 aaPredicted RBP9.19□□□□□ -0.94
SPG11-213ENST00000558988 MAP7Q14244 749 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 SYDE1Q6ZW31 735 aaPredicted RBP9.19□□□□□ -0.94
SPG11-213ENST00000558988 RASAL3Q86YV0 1011 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 CERS5Q8N5B7 392 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 KLHDC4Q8TBB5 520 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 BICC1Q9H694 974 aaKnown RBP9.19□□□□□ -0.94
SPG11-213ENST00000558988 VEZTQ9HBM0 779 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 SMC4Q9NTJ3 1288 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 FZD1Q9UP38 647 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.19□□□□□ -0.94
SPG11-213ENST00000558988 ZNF609O15014 1411 aa9.19□□□□□ -0.94
SPG11-213ENST00000558988 ZNF646O15015 1829 aaPredicted RBP9.18□□□□□ -0.94
SPG11-213ENST00000558988 FRAT2O75474 233 aaPredicted RBP9.18□□□□□ -0.94
SPG11-213ENST00000558988 CFAP100Q494V2 611 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 FAM26DQ5JW98 314 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 METTL24Q5JXM2 366 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 VPS37DQ86XT2 251 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 APOBEC3FQ8IUX4 373 aaKnown RBP9.18□□□□□ -0.94
SPG11-213ENST00000558988 PLD6Q8N2A8 252 aaKnown RBP9.18□□□□□ -0.94
SPG11-213ENST00000558988 KAZALD1Q96I82 304 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 CSRNP1Q96S65 589 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 PAPPA2Q9BXP8 1791 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 SEMA6CQ9H3T2 930 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 ACTL7BQ9Y614 415 aa9.18□□□□□ -0.94
SPG11-213ENST00000558988 MYO1BO43795 1136 aa9.17□□□□□ -0.94
SPG11-213ENST00000558988 SLFN5Q08AF3 891 aa9.17□□□□□ -0.94
SPG11-213ENST00000558988 LRRC24Q50LG9 513 aa9.17□□□□□ -0.94
SPG11-213ENST00000558988 MFSD14BQ5SR56 506 aa9.17□□□□□ -0.94
SPG11-213ENST00000558988 HHIPQ96QV1 700 aa9.17□□□□□ -0.94
SPG11-213ENST00000558988 MCOLN1Q9GZU1 580 aa9.17□□□□□ -0.94
SPG11-213ENST00000558988 PTPRCP08575 1304 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 AOX1Q06278 1338 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 IRS2Q9Y4H2 1338 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 AKAP11Q9UKA4 1901 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 PDE2AO00408 941 aaPredicted RBP9.16□□□□□ -0.94
SPG11-213ENST00000558988 C1QTNF9P0C862 333 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 IL1R1P14778 569 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 HIBADHP31937 336 aaKnown RBP9.16□□□□□ -0.94
SPG11-213ENST00000558988 FKBP1BP68106 108 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 KCNMB1Q16558 191 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 OGFOD3Q6PK18 319 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 ARMC9Q7Z3E5 817 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 ANKRD44Q8N8A2 993 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 LIN37Q96GY3 246 aaPredicted RBP9.16□□□□□ -0.94
SPG11-213ENST00000558988 DEFB129Q9H1M3 183 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 C1GALT1Q9NS00 363 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 RNF186Q9NXI6 227 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 CRIM1Q9NZV1 1036 aa9.16□□□□□ -0.94
SPG11-213ENST00000558988 KANSL3Q9P2N6 904 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms