RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TRPM4Q8TD43 1214 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 SPON1Q9HCB6 807 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 TAB2Q9NYJ8 693 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 TCEAL9Q9UHQ7 104 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 DPYDQ12882 1025 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 LRRC41Q15345 812 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 KMT5BQ4FZB7 885 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 HOOK2Q96ED9 719 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 VCPKMTQ9H867 229 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 ZHX2Q9Y6X8 837 aa12.13□□□□□ -0.47
CSPG4P5-201ENST00000558731 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 PAK1Q13153 545 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 FILIP1LQ4L180 1135 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 NOC3LQ8WTT2 800 aaKnown RBP12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 MTRQ99707 1265 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 PYM1Q9BRP8 204 aaKnown RBP12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 CNTNAP1P78357 1384 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 hCG_1984214I3L0E3 225 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 M0R2N6 131 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 MYCLP12524 364 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 ZNF713Q8N859 430 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 MRFAP1L1Q96HT8 127 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 ZNF408Q9H9D4 720 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 RMND1Q9NWS8 449 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 POTECB2RU33 542 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 ZBTB22O15209 634 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 FCER1AP12319 257 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 SMARCA1P28370 1054 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 ADKP55263 362 aaKnown RBP12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 EAPPQ56P03 285 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 MAGEC2Q9UBF1 373 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 TMX2Q9Y320 296 aa12.12□□□□□ -0.47
CSPG4P5-201ENST00000558731 ESYT2A0FGR8 921 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 E9PMD0 336 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 PRCPP42785 496 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 HMGCS2P54868 508 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 AMPD3Q01432 767 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 MAEAQ7L5Y9 396 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 MKL1Q969V6 931 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 CD2APQ9Y5K6 639 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 LRRC37AA6NMS7 1700 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 FAM237AA0A1B0GTK4 181 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 LAD1O00515 517 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 COL4A5P29400 1685 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 PSMA7O14818 248 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 IKBKBO14920 756 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 LRRC8AQ8IWT6 810 aa12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
CSPG4P5-201ENST00000558731 POTEFA5A3E0 1075 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 E2F4Q16254 413 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 NAALADL2Q58DX5 795 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 POTEGQ6S5H5 508 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 POTEEQ6S8J3 1075 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 PPFIBP1Q86W92 1011 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 TRIML1Q8N9V2 468 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 GMCL1Q96IK5 515 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 ECM29Q5VYK3 1845 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 MAPK8IP2Q13387 824 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 SRRTQ9BXP5 876 aaKnown RBP12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 ABCB11O95342 1321 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 MEIS2O14770 477 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 PRELPP51888 382 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 SARM1Q6SZW1 724 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 FAM83AQ86UY5 434 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 TPH2Q8IWU9 490 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 PDCL2Q8N4E4 241 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 GMCL1P1Q8NEA9 526 aa12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 CCDC43Q96MW1 224 aaKnown RBP12.1□□□□□ -0.47
CSPG4P5-201ENST00000558731 NPHP3-ACAD11A0A0J9YXS1 232 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 TEX33O43247 280 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 MTIF2P46199 727 aaKnown RBP12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 AK8Q96MA6 479 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 NRXN2Q9P2S2 1712 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 SPATA1Q5VX52 437 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 PPP1R18Q6NYC8 613 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 KCNK18Q7Z418 384 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 CSGALNACT2Q8N6G5 542 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 SH2D3AQ9BRG2 576 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 RPAP3Q9H6T3 665 aaPredicted RBP12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 MYH8P13535 1937 aa12.09□□□□□ -0.47
CSPG4P5-201ENST00000558731 ATRNL1Q5VV63 1379 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms