RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ASGR1P07306 291 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 SNHG28P0DPA3 235 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 SLC16A2P36021 539 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 PRSS12P56730 875 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 SNAP25P60880 206 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 FPGSQ05932 587 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 ZNF543Q08ER8 600 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 IMMTQ16891 758 aaKnown RBP9.45□□□□□ -0.9
TRAF3-205ENST00000558700 MUM1L1Q5H9M0 696 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 GPATCH4Q5T3I0 446 aaKnown RBP9.45□□□□□ -0.9
TRAF3-205ENST00000558700 ZNF697Q5TEC3 545 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 FAM109BQ6ICB4 259 aaPredicted RBP9.45□□□□□ -0.9
TRAF3-205ENST00000558700 CCSAPQ6IQ19 270 aaPredicted RBP9.45□□□□□ -0.9
TRAF3-205ENST00000558700 TTBK2Q6IQ55 1244 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 CWC27Q6UX04 472 aaKnown RBP9.45□□□□□ -0.9
TRAF3-205ENST00000558700 Q7L0L9 218 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 SH3RF1Q7Z6J0 888 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 MPHOSPH6Q99547 160 aaKnown RBP9.45□□□□□ -0.9
TRAF3-205ENST00000558700 DSCC1Q9BVC3 393 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 TMEM39AQ9NV64 488 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 LAMA3Q16787 3333 aa9.45□□□□□ -0.9
TRAF3-205ENST00000558700 NFIBO00712 420 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 TLR3O15455 904 aaKnown RBP9.44□□□□□ -0.9
TRAF3-205ENST00000558700 ZEB2O60315 1214 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 KDM4AO75164 1064 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 CABYRO75952 493 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 NKX3-2P78367 333 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 FAAP100Q0VG06 881 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 SHHQ15465 462 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 C9orf50Q5SZB4 431 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 SLC30A10Q6XR72 485 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 DGKHQ86XP1 1220 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 FBXO16Q8IX29 292 aaPredicted RBP9.44□□□□□ -0.9
TRAF3-205ENST00000558700 TTC13Q8NBP0 860 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 MORC4Q8TE76 937 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 VTI1AQ96AJ9 217 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 RNPC3Q96LT9 517 aaKnown RBP9.44□□□□□ -0.9
TRAF3-205ENST00000558700 TRAIPQ9BWF2 469 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 AP5M1Q9H0R1 490 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 KAT14Q9H8E8 782 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 CNNM2Q9H8M5 875 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 PLSCR2Q9NRY7 297 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 MTMR10Q9NXD2 777 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 CTNNA3Q9UI47 895 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 TBX21Q9UL17 535 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 STXBP5LQ9Y2K9 1186 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 ASTN1O14525 1302 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 SZT2Q5T011 3432 aa9.44□□□□□ -0.9
TRAF3-205ENST00000558700 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.43□□□□□ -0.9
TRAF3-205ENST00000558700 ARVCFO00192 962 aa9.43□□□□□ -0.9
TRAF3-205ENST00000558700 CTAGE5O15320 804 aa9.43□□□□□ -0.9
TRAF3-205ENST00000558700 ALDH5A1P51649 535 aaPredicted RBP9.43□□□□□ -0.9
TRAF3-205ENST00000558700 SMAD3P84022 425 aaKnown RBP9.43□□□□□ -0.9
TRAF3-205ENST00000558700 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRAF3-205ENST00000558700 BAATQ14032 418 aaPredicted RBP9.43□□□□□ -0.9
TRAF3-205ENST00000558700 FSCN1Q16658 493 aaKnown RBP9.43□□□□□ -0.9
TRAF3-205ENST00000558700 TTC22Q5TAA0 569 aa9.43□□□□□ -0.9
TRAF3-205ENST00000558700 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
TRAF3-205ENST00000558700 PNMA1Q8ND90 353 aa9.43□□□□□ -0.9
TRAF3-205ENST00000558700 ZKSCAN3Q9BRR0 538 aa9.43□□□□□ -0.9
TRAF3-205ENST00000558700 SEZ6LQ9BYH1 1024 aa9.43□□□□□ -0.9
TRAF3-205ENST00000558700 KRT23Q9C075 422 aa9.43□□□□□ -0.9
TRAF3-205ENST00000558700 GNEQ9Y223 722 aaKnown RBP9.43□□□□□ -0.9
TRAF3-205ENST00000558700 Q9Y3F1 56 aa9.43□□□□□ -0.9
TRAF3-205ENST00000558700 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 TNKSO95271 1327 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 TMEM265A0A087WTH1 108 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 B4DLN1 442 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 B4E1Z4 1266 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 SMPD1P17405 629 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 ITGB8P26012 769 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 CALML3P27482 149 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 MRPL12P52815 198 aaKnown RBP9.42□□□□□ -0.9
TRAF3-205ENST00000558700 BEX3Q00994 111 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 PPP2R5BQ15173 497 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 CDC37Q16543 378 aaPredicted RBP9.42□□□□□ -0.9
TRAF3-205ENST00000558700 DUSP28Q4G0W2 176 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 ASPRV1Q53RT3 343 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 IQSEC1Q6DN90 963 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 CXCL17Q6UXB2 119 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 RNF207Q6ZRF8 634 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 EEPD1Q7L9B9 569 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 FAM126BQ8IXS8 530 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 DNERQ8NFT8 737 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 ZSCAN10Q96SZ4 725 aaPredicted RBP9.42□□□□□ -0.9
TRAF3-205ENST00000558700 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
TRAF3-205ENST00000558700 KIAA1217Q5T5P2 1943 aa9.41□□□□□ -0.9
TRAF3-205ENST00000558700 ABCB11O95342 1321 aa9.41□□□□□ -0.9
TRAF3-205ENST00000558700 NKRFO15226 690 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRAF3-205ENST00000558700 DHX16O60231 1041 aaKnown RBP9.41□□□□□ -0.9
TRAF3-205ENST00000558700 TIMP1P01033 207 aa9.41□□□□□ -0.9
TRAF3-205ENST00000558700 GOLGA8HP0CJ92 632 aa9.41□□□□□ -0.9
TRAF3-205ENST00000558700 CPT1AP50416 773 aa9.41□□□□□ -0.9
TRAF3-205ENST00000558700 CDK7P50613 346 aa9.41□□□□□ -0.9
TRAF3-205ENST00000558700 RPS6P62753 249 aaKnown RBP9.41□□□□□ -0.9
TRAF3-205ENST00000558700 TUSC1Q2TAM9 212 aa9.41□□□□□ -0.9
TRAF3-205ENST00000558700 USH1GQ495M9 461 aa9.41□□□□□ -0.9
TRAF3-205ENST00000558700 BRDTQ58F21 947 aaPredicted RBP9.41□□□□□ -0.9
TRAF3-205ENST00000558700 MFSD5Q6N075 450 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms