RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 PXMP2Q9NR77 195 aa13.6□□□□□ -0.23
SHF-204ENST00000558685 COLQQ9Y215 455 aaPredicted RBP13.6□□□□□ -0.23
SHF-204ENST00000558685 DYNC1LI2O43237 492 aaPredicted RBP13.59□□□□□ -0.23
SHF-204ENST00000558685 ZBTB43O43298 467 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 ARIH2O95376 493 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 SYN1P17600 705 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 EIF2AK2P19525 551 aaKnown RBP13.59□□□□□ -0.23
SHF-204ENST00000558685 CASTP20810 708 aaKnown RBP13.59□□□□□ -0.23
SHF-204ENST00000558685 APOBRQ0VD83 1088 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 GNASQ5JWF2 1037 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 C1orf53Q5VUE5 145 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 BLOC1S2Q6QNY1 142 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 NOL8Q76FK4 1167 aaKnown RBP13.59□□□□□ -0.23
SHF-204ENST00000558685 TLK2Q86UE8 772 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 IL31RAQ8NI17 732 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 BRF1Q92994 677 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 WDR11Q9BZH6 1224 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 ZSWIM6Q9HCJ5 1215 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 MAP3K20Q9NYL2 800 aaKnown RBP13.59□□□□□ -0.23
SHF-204ENST00000558685 Q9Y3F1 56 aa13.59□□□□□ -0.23
SHF-204ENST00000558685 GCOM1H8Y6P7 765 aaPredicted RBP13.58□□□□□ -0.24
SHF-204ENST00000558685 MEIS2O14770 477 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 RGS20O76081 388 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 SEC24BO95487 1268 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 ASGR1P07306 291 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 NR3C2P08235 984 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 POLR2MP0CAP2 368 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 ADD1P35611 737 aaKnown RBP13.58□□□□□ -0.24
SHF-204ENST00000558685 RTN1Q16799 776 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 TRIM60Q495X7 471 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 ARHGEF16Q5VV41 709 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 SYNE3Q6ZMZ3 975 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 COPS5Q92905 334 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 IWS1Q96ST2 819 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 PDCD2LQ9BRP1 358 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 CNTNAP5Q8WYK1 1306 aa13.58□□□□□ -0.24
SHF-204ENST00000558685 MOXD2PA6NHM9 499 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 GOLGA8AA7E2F4 631 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 GOLGA8BA8MQT2 603 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 PSMA5P28066 241 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 RCAN1P53805 252 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 EVCP57679 992 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 TLE2Q04725 743 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 TRAF1Q13077 416 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 TOB2Q14106 344 aaPredicted RBP13.57□□□□□ -0.24
SHF-204ENST00000558685 FSCN1Q16658 493 aaKnown RBP13.57□□□□□ -0.24
SHF-204ENST00000558685 TYW1BQ6NUM6 668 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 USP17L6PQ6QN14 398 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 RUFY3Q7L099 469 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 VSIG10LQ86VR7 867 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 FCHSD1Q86WN1 690 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 ZFP91Q96JP5 570 aaPredicted RBP13.57□□□□□ -0.24
SHF-204ENST00000558685 GDF15Q99988 308 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 RBM28Q9NW13 759 aaKnown RBP13.57□□□□□ -0.24
SHF-204ENST00000558685 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
SHF-204ENST00000558685 ATP11BQ9Y2G3 1177 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 GRIN2DO15399 1336 aa13.57□□□□□ -0.24
SHF-204ENST00000558685 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
SHF-204ENST00000558685 TXNP10599 105 aaKnown RBP13.56□□□□□ -0.24
SHF-204ENST00000558685 CDK7P50613 346 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 PGM5Q15124 567 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 STXBP2Q15833 593 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 HABP4Q5JVS0 413 aaKnown RBP13.56□□□□□ -0.24
SHF-204ENST00000558685 CXCL17Q6UXB2 119 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 SEPT14Q6ZU15 432 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 PCSK9Q8NBP7 692 aaKnown RBP13.56□□□□□ -0.24
SHF-204ENST00000558685 GPKOWQ92917 476 aaPredicted RBP eCLIP13.56□□□□□ -0.24
SHF-204ENST00000558685 UPF3BQ9BZI7 483 aaKnown RBP13.56□□□□□ -0.24
SHF-204ENST00000558685 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 AP5M1Q9H0R1 490 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 SPC25Q9HBM1 224 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 SEC63Q9UGP8 760 aaKnown RBP13.56□□□□□ -0.24
SHF-204ENST00000558685 V9GY48 417 aaPredicted RBP13.56□□□□□ -0.24
SHF-204ENST00000558685 ELP1O95163 1332 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 FRMPD4Q14CM0 1322 aa13.56□□□□□ -0.24
SHF-204ENST00000558685 TRIM43BA6NCK2 446 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 B4DLN1 442 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 PIK3CDO00329 1044 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 ITGB8P26012 769 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 PDIA3P30101 505 aaKnown RBP13.55□□□□□ -0.24
SHF-204ENST00000558685 MAGEA10P43363 369 aaPredicted RBP13.55□□□□□ -0.24
SHF-204ENST00000558685 MRPL12P52815 198 aaKnown RBP13.55□□□□□ -0.24
SHF-204ENST00000558685 FGD1P98174 961 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 PPP2R5BQ15173 497 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 LY6KQ17RY6 165 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 ANKRD33Q7Z3H0 272 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 TRIM43Q96BQ3 446 aaPredicted RBP13.55□□□□□ -0.24
SHF-204ENST00000558685 MPHOSPH6Q99547 160 aaKnown RBP13.55□□□□□ -0.24
SHF-204ENST00000558685 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
SHF-204ENST00000558685 STARD7Q9NQZ5 370 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 PDLIM7Q9NR12 457 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 DDX41Q9UJV9 622 aaKnown RBP13.55□□□□□ -0.24
SHF-204ENST00000558685 NID2Q14112 1375 aa13.55□□□□□ -0.24
SHF-204ENST00000558685 A6NJR5 290 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms