RNA–Protein interactions for RNA: ENST00000558645.5

CCDC33-204, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-204ENST00000558645 GNA11P29992 359 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 MRPL12P52815 198 aaKnown RBP13.51□□□□□ -0.25
CCDC33-204ENST00000558645 CCL14Q16627 93 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 FBXO46Q6PJ61 603 aaPredicted RBP13.51□□□□□ -0.25
CCDC33-204ENST00000558645 DPP9Q86TI2 863 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 FERMT3Q86UX7 667 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 FAM133AQ8N9E0 248 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 DAGLBQ8NCG7 672 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 RGS22Q8NE09 1264 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 IL31RAQ8NI17 732 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 USP6NLQ92738 828 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 TNFRSF25Q93038 417 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 NUDT12Q9BQG2 462 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 ANO3Q9BYT9 981 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 FLRT1Q9NZU1 646 aa13.51□□□□□ -0.25
CCDC33-204ENST00000558645 STX6O43752 255 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 STRNO43815 780 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 EIF2AK2P19525 551 aaKnown RBP13.5□□□□□ -0.25
CCDC33-204ENST00000558645 FLT3LGP49771 235 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 GHRHRQ02643 423 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 MAP2K5Q13163 448 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 ZNF792Q3KQV3 632 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 PIK3AP1Q6ZUJ8 805 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 ABRAQ8N0Z2 381 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 MTMR6Q9Y217 621 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 TRIM17Q9Y577 477 aa13.5□□□□□ -0.25
CCDC33-204ENST00000558645 RPTORQ8N122 1335 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 SPDYE3A6NKU9 549 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 PDCP20941 246 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 RGS2P41220 211 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 ALDH5A1P51649 535 aaPredicted RBP13.49□□□□□ -0.25
CCDC33-204ENST00000558645 GNL2Q13823 731 aaKnown RBP13.49□□□□□ -0.25
CCDC33-204ENST00000558645 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC33-204ENST00000558645 INF2Q27J81 1249 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 ARHGEF16Q5VV41 709 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 GALNT17Q6IS24 598 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 OTOP1Q7RTM1 612 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 BICD2Q8TD16 824 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 RMDN3Q96TC7 470 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 BRMS1Q9HCU9 246 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 PXMP2Q9NR77 195 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 SRRDQ9UH36 339 aa13.49□□□□□ -0.25
CCDC33-204ENST00000558645 BRCA2P51587 3418 aa13.48□□□□□ -0.25
CCDC33-204ENST00000558645 WNT7AO00755 349 aa13.48□□□□□ -0.25
CCDC33-204ENST00000558645 MYCLP12524 364 aaPredicted RBP13.48□□□□□ -0.25
CCDC33-204ENST00000558645 DDIT3P35638 169 aa13.48□□□□□ -0.25
CCDC33-204ENST00000558645 PGM5Q15124 567 aa13.48□□□□□ -0.25
CCDC33-204ENST00000558645 SOCS4Q8WXH5 440 aa13.48□□□□□ -0.25
CCDC33-204ENST00000558645 MAML3Q96JK9 1138 aa13.48□□□□□ -0.25
CCDC33-204ENST00000558645 APBA2Q99767 749 aa13.48□□□□□ -0.25
CCDC33-204ENST00000558645 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
CCDC33-204ENST00000558645 ZDHHC9Q9Y397 364 aa13.48□□□□□ -0.25
CCDC33-204ENST00000558645 MYH9P35579 1960 aaKnown RBP13.48□□□□□ -0.25
CCDC33-204ENST00000558645 CCDC194A0A1B0GVG4 234 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 EDIL3O43854 480 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 ELNP15502 786 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 ATP2B1P20020 1258 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 MLLT1Q03111 559 aaPredicted RBP13.47□□□□□ -0.25
CCDC33-204ENST00000558645 TRIM32Q13049 653 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 RESTQ13127 1097 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 AP3B2Q13367 1082 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 NONOQ15233 471 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC33-204ENST00000558645 FOXD4L6Q3SYB3 417 aaPredicted RBP13.47□□□□□ -0.25
CCDC33-204ENST00000558645 FAM173BQ6P4H8 233 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 FOXD4L3Q6VB84 417 aaPredicted RBP13.47□□□□□ -0.25
CCDC33-204ENST00000558645 EEPD1Q7L9B9 569 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 FAM177A1Q8N128 213 aaPredicted RBP13.47□□□□□ -0.25
CCDC33-204ENST00000558645 SAMD3Q8N6K7 520 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 NSUN6Q8TEA1 469 aaKnown RBP13.47□□□□□ -0.25
CCDC33-204ENST00000558645 TBCKQ8TEA7 893 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 UIMC1Q96RL1 719 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 PDCD2LQ9BRP1 358 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 FOXP1Q9H334 677 aaPredicted RBP13.47□□□□□ -0.25
CCDC33-204ENST00000558645 MAP3K20Q9NYL2 800 aaKnown RBP13.47□□□□□ -0.25
CCDC33-204ENST00000558645 RTEL1Q9NZ71 1219 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 PTCH2Q9Y6C5 1203 aa13.47□□□□□ -0.25
CCDC33-204ENST00000558645 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.25
CCDC33-204ENST00000558645 TNRC18O15417 2968 aaPredicted RBP13.46□□□□□ -0.25
CCDC33-204ENST00000558645 FOSP01100 380 aaPredicted RBP13.46□□□□□ -0.25
CCDC33-204ENST00000558645 ZSCAN22P10073 491 aaPredicted RBP13.46□□□□□ -0.25
CCDC33-204ENST00000558645 U2AF2P26368 475 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCDC33-204ENST00000558645 ARHGAP4P98171 946 aa13.46□□□□□ -0.25
CCDC33-204ENST00000558645 NBR1Q14596 966 aa13.46□□□□□ -0.25
CCDC33-204ENST00000558645 PRAMEF19Q5SWL8 479 aa13.46□□□□□ -0.25
CCDC33-204ENST00000558645 ARMCX2Q7L311 632 aa13.46□□□□□ -0.25
CCDC33-204ENST00000558645 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
CCDC33-204ENST00000558645 NOSTRINQ8IVI9 506 aa13.46□□□□□ -0.25
CCDC33-204ENST00000558645 TRIB2Q92519 343 aa13.46□□□□□ -0.25
CCDC33-204ENST00000558645 CHAMP1Q96JM3 812 aa13.46□□□□□ -0.25
CCDC33-204ENST00000558645 MKI67P46013 3256 aaKnown RBP13.45□□□□□ -0.26
CCDC33-204ENST00000558645 NR3C2P08235 984 aa13.45□□□□□ -0.26
CCDC33-204ENST00000558645 HOXC6P09630 235 aa13.45□□□□□ -0.26
CCDC33-204ENST00000558645 HOXD10P28358 340 aa13.45□□□□□ -0.26
CCDC33-204ENST00000558645 CYP2C19P33261 490 aa13.45□□□□□ -0.26
CCDC33-204ENST00000558645 SREBF1P36956 1147 aa13.45□□□□□ -0.26
CCDC33-204ENST00000558645 MRPS9P82933 396 aaKnown RBP13.45□□□□□ -0.26
CCDC33-204ENST00000558645 PDE4DQ08499 809 aa13.45□□□□□ -0.26
CCDC33-204ENST00000558645 FBXO16Q8IX29 292 aaPredicted RBP13.45□□□□□ -0.26
CCDC33-204ENST00000558645 DNERQ8NFT8 737 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms