RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ZNF274Q96GC6 653 aaPredicted RBP17.98■□□□□ 0.47
LINC01220-201ENST00000558575 LZTS2Q9BRK4 669 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 HOMER2Q9NSB8 354 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 RNF146Q9NTX7 359 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 TPCN1Q9ULQ1 816 aa17.98■□□□□ 0.47
LINC01220-201ENST00000558575 NAP1L2Q9ULW6 460 aaPredicted RBP17.98■□□□□ 0.47
LINC01220-201ENST00000558575 TRANK1O15050 2925 aa17.97■□□□□ 0.47
LINC01220-201ENST00000558575 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.97■□□□□ 0.47
LINC01220-201ENST00000558575 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.97■□□□□ 0.47
LINC01220-201ENST00000558575 ZBTB5O15062 677 aa17.97■□□□□ 0.47
LINC01220-201ENST00000558575 MYCNP04198 464 aaPredicted RBP17.97■□□□□ 0.47
LINC01220-201ENST00000558575 FCER1AP12319 257 aa17.97■□□□□ 0.47
LINC01220-201ENST00000558575 ADORA2AP29274 412 aa17.97■□□□□ 0.47
LINC01220-201ENST00000558575 NTRK3Q16288 839 aa17.97■□□□□ 0.47
LINC01220-201ENST00000558575 ABRAQ8N0Z2 381 aa17.97■□□□□ 0.47
LINC01220-201ENST00000558575 PIBF1Q8WXW3 757 aa17.97■□□□□ 0.47
LINC01220-201ENST00000558575 MMP19Q99542 508 aa17.97■□□□□ 0.47
LINC01220-201ENST00000558575 PRDM12Q9H4Q4 367 aa17.97■□□□□ 0.47
LINC01220-201ENST00000558575 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
LINC01220-201ENST00000558575 NID2Q14112 1375 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 DNAJC25-GNG10A0A024R161 153 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 PNMA6FA0A0J9YX94 578 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 hCG_1642624A0A1W2PR95 340 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 NFIBO00712 420 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 PGK2P07205 417 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 METAP2P50579 478 aaKnown RBP eCLIP17.96■□□□□ 0.47
LINC01220-201ENST00000558575 CCT2P78371 535 aaKnown RBP17.96■□□□□ 0.47
LINC01220-201ENST00000558575 ADGRE1Q14246 886 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 USH1GQ495M9 461 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 FBXO11Q86XK2 927 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 HOMER1Q86YM7 354 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 TBC1D5Q92609 795 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
LINC01220-201ENST00000558575 NCOA5Q9HCD5 579 aaKnown RBP17.96■□□□□ 0.47
LINC01220-201ENST00000558575 A1CFQ9NQ94 594 aaKnown RBP17.96■□□□□ 0.47
LINC01220-201ENST00000558575 IVNS1ABPQ9Y6Y0 642 aa17.96■□□□□ 0.47
LINC01220-201ENST00000558575 KIAA0355O15063 1070 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 CLTBP09497 229 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 PBX2P40425 430 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 FPGSQ05932 587 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 KCTD2Q14681 263 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 PPP2R5BQ15173 497 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 LRRC41Q15345 812 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 CCDC85BQ15834 202 aaPredicted RBP17.95■□□□□ 0.46
LINC01220-201ENST00000558575 ZNF792Q3KQV3 632 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 C1QTNF1Q9BXJ1 281 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 ACAD9Q9H845 621 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 UPF2Q9HAU5 1272 aaKnown RBP17.95■□□□□ 0.46
LINC01220-201ENST00000558575 FBXO40Q9UH90 709 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 LRRC37A2A6NM11 1700 aa17.95■□□□□ 0.46
LINC01220-201ENST00000558575 XIRP2A4UGR9 3374 aa17.94■□□□□ 0.46
LINC01220-201ENST00000558575 OPLAHO14841 1288 aa17.94■□□□□ 0.46
LINC01220-201ENST00000558575 LARGE1O95461 756 aa17.94■□□□□ 0.46
LINC01220-201ENST00000558575 FGD4Q96M96 766 aa17.94■□□□□ 0.46
LINC01220-201ENST00000558575 PURBQ96QR8 312 aaKnown RBP17.94■□□□□ 0.46
LINC01220-201ENST00000558575 AMNQ9BXJ7 453 aa17.94■□□□□ 0.46
LINC01220-201ENST00000558575 PNMA2Q9UL42 364 aa17.94■□□□□ 0.46
LINC01220-201ENST00000558575 V9GY48 417 aaPredicted RBP17.94■□□□□ 0.46
LINC01220-201ENST00000558575 CNTNAP5Q8WYK1 1306 aa17.94■□□□□ 0.46
LINC01220-201ENST00000558575 GRXCR1A8MXD5 290 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 SEPT4O43236 478 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 PFKFB2O60825 505 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 RAG1P15918 1043 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 CNTN2Q02246 1040 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 STK3Q13188 491 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 BAATQ14032 418 aaPredicted RBP17.93■□□□□ 0.46
LINC01220-201ENST00000558575 ME3Q16798 604 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 DPP9Q86TI2 863 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 ANKRD35Q8N283 1001 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 RRP36Q96EU6 259 aaKnown RBP17.93■□□□□ 0.46
LINC01220-201ENST00000558575 PBX4Q9BYU1 374 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 CYP39A1Q9NYL5 469 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 ARIH1Q9Y4X5 557 aaPredicted RBP17.93■□□□□ 0.46
LINC01220-201ENST00000558575 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
LINC01220-201ENST00000558575 PRRC2BQ5JSZ5 2229 aaKnown RBP17.92■□□□□ 0.46
LINC01220-201ENST00000558575 CCDC196A0A1B0GTZ2 297 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 DTNBO60941 627 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 PPFIA3O75145 1194 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 SCRN1Q12765 414 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 RABEP1Q15276 862 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 ANKRD1Q15327 319 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 PRAMEF19Q5SWL8 479 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 OLFML2BQ68BL8 750 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 NSMFQ6X4W1 530 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 NOL8Q76FK4 1167 aaKnown RBP17.92■□□□□ 0.46
LINC01220-201ENST00000558575 FAM133AQ8N9E0 248 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 RGS22Q8NE09 1264 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 DDX11Q96FC9 970 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC01220-201ENST00000558575 LRFN3Q9BTN0 628 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 PHF24Q9UPV7 400 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 ABCB11O95342 1321 aa17.92■□□□□ 0.46
LINC01220-201ENST00000558575 SOWAHBA6NEL2 793 aa17.91■□□□□ 0.46
LINC01220-201ENST00000558575 BMP1P13497 986 aa17.91■□□□□ 0.46
LINC01220-201ENST00000558575 IFNAR1P17181 557 aa17.91■□□□□ 0.46
LINC01220-201ENST00000558575 ST3GAL1Q11201 340 aa17.91■□□□□ 0.46
LINC01220-201ENST00000558575 PKN1Q16512 942 aa17.91■□□□□ 0.46
LINC01220-201ENST00000558575 NECAB1Q8N987 351 aa17.91■□□□□ 0.46
LINC01220-201ENST00000558575 PHKBQ93100 1093 aa17.91■□□□□ 0.46
LINC01220-201ENST00000558575 MAML3Q96JK9 1138 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms