RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 SLITRK4Q8IW52 837 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 GATA6Q92908 595 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 TSR2Q969E8 191 aaKnown RBP5.52□□□□□ -1.53
SPG11-211ENST00000558561 TJP2Q9UDY2 1190 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 PCDHB14Q9Y5E9 798 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 COL15A1P39059 1388 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 CARMIL3Q8ND23 1372 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 PLEKHG2Q9H7P9 1386 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 KDM3BQ7LBC6 1761 aa5.52□□□□□ -1.53
SPG11-211ENST00000558561 KIAA1551Q9HCM1 1747 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 UPK3BL1B0FP48 263 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 UPK3BL2E5RIL1 263 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 HTR3BO95264 441 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 IGLV1-40P01703 118 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 PLCG1P19174 1290 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 GPTP24298 496 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 PDE4BQ07343 736 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 AIMP1Q12904 312 aaKnown RBP5.51□□□□□ -1.53
SPG11-211ENST00000558561 GK5Q6ZS86 529 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 G2E3Q7L622 706 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 ACSF2Q96CM8 615 aaPredicted RBP5.51□□□□□ -1.53
SPG11-211ENST00000558561 TBC1D32Q96NH3 1257 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 PSMG3-AS1Q96PY0 264 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 TEX13AQ9BXU3 409 aaPredicted RBP5.51□□□□□ -1.53
SPG11-211ENST00000558561 PHAXQ9H814 394 aaKnown RBP5.51□□□□□ -1.53
SPG11-211ENST00000558561 REV1Q9UBZ9 1251 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 INPP5FQ9Y2H2 1132 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 CD2APQ9Y5K6 639 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 CICQ96RK0 1608 aaPredicted RBP5.51□□□□□ -1.53
SPG11-211ENST00000558561 NUP98P52948 1817 aa5.51□□□□□ -1.53
SPG11-211ENST00000558561 TAF1P21675 1872 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 ANKRD31Q8N7Z5 1873 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 FAM170BA6NMN3 283 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 WDR64B1ANS9 1081 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 RBAK-RBAKDNI3L0D1 243 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 K7ELQ4 463 aaPredicted RBP5.5□□□□□ -1.53
SPG11-211ENST00000558561 DNAJA2O60884 412 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 LEFTY1O75610 366 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 F13BP05160 661 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 YY1P25490 414 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 SUSD4Q5VX71 490 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 DUSP27Q5VZP5 1158 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 PRR5LQ6MZQ0 368 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 ARMCX6Q7L4S7 300 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 COPS6Q7L5N1 327 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 ZAR1Q86SH2 424 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 KCT2Q8NC54 265 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 SHKBP1Q8TBC3 707 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 XAGE3Q8WTP9 111 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 GPRASP2Q96D09 838 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 TMEM87BQ96K49 555 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 DPH2Q9BQC3 489 aaPredicted RBP5.5□□□□□ -1.53
SPG11-211ENST00000558561 DBNDD2Q9BQY9 259 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 PNNQ9H307 717 aaKnown RBP5.5□□□□□ -1.53
SPG11-211ENST00000558561 CAPN10Q9HC96 672 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 GINM1Q9NU53 330 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 EFR3BQ9Y2G0 817 aa5.5□□□□□ -1.53
SPG11-211ENST00000558561 CCDC88AQ3V6T2 1871 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 CHURC1-FNTBB4DL54 471 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 FAM87AP0C7U9 286 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 GJA8P48165 433 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 ZNF165P49910 485 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 PRAMEF13Q5VWM6 474 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 ARHGAP27Q6ZUM4 889 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 C2CD5Q86YS7 1000 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 MCATQ8IVS2 390 aaKnown RBP5.49□□□□□ -1.53
SPG11-211ENST00000558561 REXO1Q8N1G1 1221 aaKnown RBP5.49□□□□□ -1.53
SPG11-211ENST00000558561 FOXQ1Q9C009 403 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 ANTXR1Q9H6X2 564 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 EHMT1Q9H9B1 1298 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 CHPF2Q9P2E5 772 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 ADAM30Q9UKF2 790 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 PPT2Q9UMR5 302 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 NIP7Q9Y221 180 aaKnown RBP eCLIP5.49□□□□□ -1.53
SPG11-211ENST00000558561 GOLGB1Q14789 3259 aaKnown RBP5.49□□□□□ -1.53
SPG11-211ENST00000558561 PXDNLA1KZ92 1463 aa5.49□□□□□ -1.53
SPG11-211ENST00000558561 UBN2Q6ZU65 1347 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 SLX4Q8IY92 1834 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 KIF13BQ9NQT8 1826 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 CACNA1SQ13698 1873 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 A0A087WZG4 1122 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 VAMP4O75379 141 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 LRIG2O94898 1065 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 ATE1O95260 518 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 CST3P01034 146 aaPredicted RBP5.48□□□□□ -1.53
SPG11-211ENST00000558561 CAP2P40123 477 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 TMEM201Q5SNT2 666 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 SLC6A19Q695T7 634 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 OGFOD3Q6PK18 319 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 ZNF765Q7L2R6 523 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 ZDHHC13Q8IUH4 622 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 MRPL41Q8IXM3 137 aaKnown RBP5.48□□□□□ -1.53
SPG11-211ENST00000558561 ZNF34Q8IZ26 560 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 TOP6BLQ8N6T0 577 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 RIN3Q8TB24 985 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 RASGRP4Q8TDF6 673 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 ZNF622Q969S3 477 aaKnown RBP eCLIP5.48□□□□□ -1.53
SPG11-211ENST00000558561 DUSP23Q9BVJ7 150 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 PRDM10Q9NQV6 1147 aa5.48□□□□□ -1.53
SPG11-211ENST00000558561 KLHL3Q9UH77 587 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms