RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-207ENST00000558500 ARPP21Q9UBL0 812 aaPredicted RBP8.07□□□□□ -1.12
LRRC28-207ENST00000558500 PRKAG3Q9UGI9 489 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 SYNPO2Q9UMS6 1093 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 SLC4A4Q9Y6R1 1079 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 ZDBF2Q9HCK1 2354 aa8.07□□□□□ -1.12
LRRC28-207ENST00000558500 COL11A1P12107 1806 aaPredicted RBP8.06□□□□□ -1.12
LRRC28-207ENST00000558500 TMEM232C9JQI7 657 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 BMP3P12645 472 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 ALAS1P13196 640 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 FOXK2Q01167 660 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 CNKSR3Q6P9H4 555 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 ADHFE1Q8IWW8 467 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 CCDC155Q8N6L0 562 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 GMCL1P1Q8NEA9 526 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 PRSS33Q8NF86 280 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 AFAP1L1Q8TED9 768 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 WDR11Q9BZH6 1224 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 UPF3BQ9BZI7 483 aaKnown RBP8.06□□□□□ -1.12
LRRC28-207ENST00000558500 MKNK2Q9HBH9 465 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 IL1RAPL2Q9NP60 686 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 CYP39A1Q9NYL5 469 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 NOD1Q9Y239 953 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 FAM50BQ9Y247 325 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 EXOC6BQ9Y2D4 811 aa8.06□□□□□ -1.12
LRRC28-207ENST00000558500 RBM47A0AV96 593 aaKnown RBP8.05□□□□□ -1.12
LRRC28-207ENST00000558500 A6NJR5 290 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 KPNA6O60684 536 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 CXCL10P02778 98 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 CHGBP05060 677 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 SELPP16109 830 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 IRS1P35568 1242 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 STAT2P52630 851 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 PTPN5P54829 565 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 COL19A1Q14993 1142 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 UBE3CQ15386 1083 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 PTPROQ16827 1216 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 TCTN1Q2MV58 587 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 SBK1Q52WX2 424 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 TIGD5Q53EQ6 642 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 BRDTQ58F21 947 aaPredicted RBP8.05□□□□□ -1.12
LRRC28-207ENST00000558500 MUM1L1Q5H9M0 696 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 SLFN13Q68D06 897 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 NSMFQ6X4W1 530 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 FAM160B2Q86V87 743 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 STK11IPQ8N1F8 1099 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 LRRC47Q8N1G4 583 aaKnown RBP8.05□□□□□ -1.12
LRRC28-207ENST00000558500 OR6J1Q8NGC5 347 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 CAGE1Q8TC20 777 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 RHPN1Q8TCX5 695 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 PABPC5Q96DU9 382 aaKnown RBP8.05□□□□□ -1.12
LRRC28-207ENST00000558500 MRPL38Q96DV4 380 aaKnown RBP8.05□□□□□ -1.12
LRRC28-207ENST00000558500 CEP95Q96GE4 821 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 PURBQ96QR8 312 aaKnown RBP8.05□□□□□ -1.12
LRRC28-207ENST00000558500 CRBNQ96SW2 442 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 C17orf80Q9BSJ5 609 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.05□□□□□ -1.12
LRRC28-207ENST00000558500 PAG1Q9NWQ8 432 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 MTMR4Q9NYA4 1195 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 CTNNA3Q9UI47 895 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 ZNF318Q5VUA4 2279 aa8.05□□□□□ -1.12
LRRC28-207ENST00000558500 CACNA1HO95180 2353 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 LOC102724159A0A0B4J2E5 919 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 ABHD14A-ACY1A0A1B0GW23 586 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 EFCAB14O75071 495 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 PARNO95453 639 aaKnown RBP8.04□□□□□ -1.12
LRRC28-207ENST00000558500 TTLL1O95922 423 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 RBL2Q08999 1139 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 PWP2Q15269 919 aaKnown RBP8.04□□□□□ -1.12
LRRC28-207ENST00000558500 PTGISQ16647 500 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 HERC4Q5GLZ8 1057 aaPredicted RBP8.04□□□□□ -1.12
LRRC28-207ENST00000558500 ZKSCAN2Q63HK3 967 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 FAM117BQ6P1L5 589 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 CEP85Q6P2H3 762 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 LRRC8DQ7L1W4 858 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 BANK1Q8NDB2 785 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 CHURC1Q8WUH1 139 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 STAG1Q8WVM7 1258 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 CTAGE1Q96RT6 745 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 PUS7LQ9H0K6 701 aaKnown RBP8.04□□□□□ -1.12
LRRC28-207ENST00000558500 ADD3Q9UEY8 706 aaKnown RBP8.04□□□□□ -1.12
LRRC28-207ENST00000558500 ISY1Q9ULR0 285 aaKnown RBP8.04□□□□□ -1.12
LRRC28-207ENST00000558500 SPTBN4Q9H254 2564 aa8.04□□□□□ -1.12
LRRC28-207ENST00000558500 RAD50Q92878 1312 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 COL4A4P53420 1690 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 GSG1L2A8MUP6 293 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 NKRFO15226 690 aaKnown RBP eCLIP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 PLA2G6O60733 806 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 NBNO60934 754 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 PRDM1O75626 825 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 IFIT2P09913 472 aaKnown RBP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 ALDH5A1P51649 535 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 SNAP25P60880 206 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 IKQ13123 557 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 IKBKEQ14164 716 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 MFSD10Q14728 455 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 PPP2R5BQ15173 497 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 SMAD2Q15796 467 aaKnown RBP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 HSP90AB4PQ58FF6 505 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 TCEAL5Q5H9L2 206 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms