RNA–Protein interactions for RNA: ENST00000558380.1

PIF1-203, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-203ENST00000558380 TMEM39AQ9NV64 488 aa18.14■□□□□ 0.49
PIF1-203ENST00000558380 SH2B2O14492 632 aaPredicted RBP18.13■□□□□ 0.49
PIF1-203ENST00000558380 PRC1O43663 620 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 CD4P01730 458 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 RAG1P15918 1043 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 CPT1AP50416 773 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 CASC1Q6TDU7 716 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 ZNF654Q8IZM8 581 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 PIGSQ96S52 555 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 RMDN3Q96TC7 470 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 PCDHA1Q9Y5I3 950 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 GRIN2DO15399 1336 aa18.13■□□□□ 0.49
PIF1-203ENST00000558380 PNMA6FA0A0J9YX94 578 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 TIMP1P01033 207 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 SMARCA1P28370 1054 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 LIFRP42702 1097 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 ITGA7Q13683 1181 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 COL9A3Q14050 684 aaPredicted RBP18.12■□□□□ 0.49
PIF1-203ENST00000558380 CCDC62Q6P9F0 684 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 TMTC2Q8N394 836 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 VTI1AQ96AJ9 217 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 SPZ1Q9BXG8 430 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 POLR3EQ9NVU0 708 aa18.12■□□□□ 0.49
PIF1-203ENST00000558380 A6NJR5 290 aa18.11■□□□□ 0.49
PIF1-203ENST00000558380 TLR3O15455 904 aaKnown RBP18.11■□□□□ 0.49
PIF1-203ENST00000558380 CDC45O75419 566 aa18.11■□□□□ 0.49
PIF1-203ENST00000558380 ARIH2O95376 493 aa18.11■□□□□ 0.49
PIF1-203ENST00000558380 CFBP00751 764 aa18.11■□□□□ 0.49
PIF1-203ENST00000558380 PURAQ00577 322 aaKnown RBP18.11■□□□□ 0.49
PIF1-203ENST00000558380 TTLL4Q14679 1199 aa18.11■□□□□ 0.49
PIF1-203ENST00000558380 STXBP2Q15833 593 aa18.11■□□□□ 0.49
PIF1-203ENST00000558380 HOMER1Q86YM7 354 aa18.11■□□□□ 0.49
PIF1-203ENST00000558380 OR6J1Q8NGC5 347 aa18.11■□□□□ 0.49
PIF1-203ENST00000558380 GPHNQ9NQX3 736 aaPredicted RBP18.11■□□□□ 0.49
PIF1-203ENST00000558380 PXMP2Q9NR77 195 aa18.11■□□□□ 0.49
PIF1-203ENST00000558380 TXNP10599 105 aaKnown RBP18.1■□□□□ 0.49
PIF1-203ENST00000558380 KIF5BP33176 963 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 FPGSQ05932 587 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 SHHQ15465 462 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 TSGA10IPQ3SY00 556 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 C9orf50Q5SZB4 431 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 RNF20Q5VTR2 975 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 ARHGEF16Q5VV41 709 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 MFSD5Q6N075 450 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 CCDC136Q96JN2 1154 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 LZTS2Q9BRK4 669 aa18.1■□□□□ 0.49
PIF1-203ENST00000558380 EIF3JO75822 258 aaKnown RBP18.09■□□□□ 0.49
PIF1-203ENST00000558380 NR3C2P08235 984 aa18.09■□□□□ 0.49
PIF1-203ENST00000558380 CTCFLQ8NI51 663 aaPredicted RBP18.09■□□□□ 0.49
PIF1-203ENST00000558380 PDCD2LQ9BRP1 358 aa18.09■□□□□ 0.49
PIF1-203ENST00000558380 MYL10Q9BUA6 226 aa18.09■□□□□ 0.49
PIF1-203ENST00000558380 MYH6P13533 1939 aa18.08■□□□□ 0.49
PIF1-203ENST00000558380 FRMPD4Q14CM0 1322 aa18.08■□□□□ 0.49
PIF1-203ENST00000558380 KPNA6O60684 536 aa18.08■□□□□ 0.48
PIF1-203ENST00000558380 CALM1P0DP23 149 aa18.08■□□□□ 0.48
PIF1-203ENST00000558380 CALM2P0DP24 149 aa18.08■□□□□ 0.48
PIF1-203ENST00000558380 CALM3P0DP25 149 aa18.08■□□□□ 0.48
PIF1-203ENST00000558380 EIF2AK2P19525 551 aaKnown RBP18.08■□□□□ 0.48
PIF1-203ENST00000558380 GNAQP50148 359 aa18.08■□□□□ 0.48
PIF1-203ENST00000558380 EPHB4P54760 987 aa18.08■□□□□ 0.48
PIF1-203ENST00000558380 BRDTQ58F21 947 aaPredicted RBP18.08■□□□□ 0.48
PIF1-203ENST00000558380 FAM109BQ6ICB4 259 aaPredicted RBP18.08■□□□□ 0.48
PIF1-203ENST00000558380 COPS5Q92905 334 aa18.08■□□□□ 0.48
PIF1-203ENST00000558380 EMID1Q96A84 441 aaPredicted RBP18.08■□□□□ 0.48
PIF1-203ENST00000558380 MTG1Q9BT17 334 aaPredicted RBP18.08■□□□□ 0.48
PIF1-203ENST00000558380 CCDC69A6NI79 296 aa18.07■□□□□ 0.48
PIF1-203ENST00000558380 GCOM1H8Y6P7 765 aaPredicted RBP18.07■□□□□ 0.48
PIF1-203ENST00000558380 POLR2MP0CAP2 368 aa18.07■□□□□ 0.48
PIF1-203ENST00000558380 PSMC6P62333 389 aa18.07■□□□□ 0.48
PIF1-203ENST00000558380 ARHGAP1Q07960 439 aa18.07■□□□□ 0.48
PIF1-203ENST00000558380 ALDH8A1Q9H2A2 487 aaPredicted RBP18.07■□□□□ 0.48
PIF1-203ENST00000558380 DDX41Q9UJV9 622 aaKnown RBP18.07■□□□□ 0.48
PIF1-203ENST00000558380 B4GALT4O60513 344 aa18.06■□□□□ 0.48
PIF1-203ENST00000558380 GH1P01241 217 aa18.06■□□□□ 0.48
PIF1-203ENST00000558380 HOXA13P31271 388 aaPredicted RBP18.06■□□□□ 0.48
PIF1-203ENST00000558380 EXOSC10Q01780 885 aaKnown RBP18.06■□□□□ 0.48
PIF1-203ENST00000558380 PGM5Q15124 567 aa18.06■□□□□ 0.48
PIF1-203ENST00000558380 LY6KQ17RY6 165 aa18.06■□□□□ 0.48
PIF1-203ENST00000558380 NFXL1Q6ZNB6 911 aa18.06■□□□□ 0.48
PIF1-203ENST00000558380 SEPT14Q6ZU15 432 aa18.06■□□□□ 0.48
PIF1-203ENST00000558380 VSIG10LQ86VR7 867 aa18.06■□□□□ 0.48
PIF1-203ENST00000558380 RRP36Q96EU6 259 aaKnown RBP18.06■□□□□ 0.48
PIF1-203ENST00000558380 NEK1Q96PY6 1258 aa18.06■□□□□ 0.48
PIF1-203ENST00000558380 SLC12A7Q9Y666 1083 aa18.06■□□□□ 0.48
PIF1-203ENST00000558380 SCN10AQ9Y5Y9 1956 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 RGS20O76081 388 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 PLEKHA8P1O95397 391 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 MMP3P08254 477 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 MYL3P08590 195 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 SMAD3P84022 425 aaKnown RBP18.05■□□□□ 0.48
PIF1-203ENST00000558380 PTPN11Q06124 597 aaPredicted RBP18.05■□□□□ 0.48
PIF1-203ENST00000558380 PPIGQ13427 754 aaKnown RBP eCLIP18.05■□□□□ 0.483e-8■■□□□ 14
PIF1-203ENST00000558380 NFRKBQ6P4R8 1299 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 KCNV1Q6PIU1 500 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 RASEFQ8IZ41 740 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 TMEM199Q8N511 208 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 SRBD1Q8N5C6 995 aaKnown RBP18.05■□□□□ 0.48
PIF1-203ENST00000558380 DEFB123Q8N688 67 aa18.05■□□□□ 0.48
PIF1-203ENST00000558380 KCNB2Q92953 911 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms