RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 STAT6P42226 847 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 CARSP49589 748 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 CASP7P55210 303 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 PAK2Q13177 524 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 PTGDRQ13258 359 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 FAM153CQ494X1 144 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 TTC38Q5R3I4 469 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 HAUS3Q68CZ6 603 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 NAIF1Q69YI7 327 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 CYB5D1Q6P9G0 228 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 KDM7AQ6ZMT4 941 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 SGMS1Q86VZ5 419 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 FMNL3Q8IVF7 1028 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 CRACR2BQ8N4Y2 399 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 MS4A14Q96JA4 679 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 TRIM6Q9C030 488 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 RBM12Q9NTZ6 932 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 FAM153AQ9UHL3 310 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF652Q9Y2D9 606 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 COL18A1P39060 1754 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 ATXN2Q99700 1313 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF233A6NK53 670 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 H7C1W4 665 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 BUB1O43683 1085 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 GTPBP6O43824 516 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 FAM107AO95990 144 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 PLEKP08567 350 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 TCP1P17987 556 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 ADD2P35612 726 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 LIFRP42702 1097 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 DNM2P50570 870 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 NKX1-1Q15270 411 aaPredicted RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 EARS2Q5JPH6 523 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 TTLL7Q6ZT98 887 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 SH3RF1Q7Z6J0 888 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 CCDC50Q8IVM0 306 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 RPGRQ92834 1020 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 CYFIP2Q96F07 1278 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 EXOC1Q9NV70 894 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 DDX20Q9UHI6 824 aaKnown RBP5.61□□□□□ -1.51
HMG20A-204ENST00000558288 BAIAP2L1Q9UHR4 511 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 RIPOR2Q9Y4F9 1068 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 NHSQ6T4R5 1651 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 CHD4Q14839 1912 aa5.61□□□□□ -1.51
HMG20A-204ENST00000558288 PSMA7O14818 248 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 PPP1R12AO14974 1030 aaPredicted RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 HSPA1AP0DMV8 641 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 HSPA1BP0DMV9 641 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 PEX19P40855 299 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 MCAMP43121 646 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 RC3H1Q5TC82 1133 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 TBC1D9BQ66K14 1250 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 YTHDF3Q7Z739 585 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 CCDC170Q8IYT3 715 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 CSGALNACT2Q8N6G5 542 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 FANCBQ8NB91 859 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 ATP6V1G3Q96LB4 118 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 TUBGCP2Q9BSJ2 902 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 ACTR5Q9H9F9 607 aaPredicted RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF277Q9NRM2 450 aaPredicted RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 NARFQ9UHQ1 456 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 PLAAQ9Y263 795 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 PCDHA13Q9Y5I0 950 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 SLC4A4Q9Y6R1 1079 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 AFDNP55196 1824 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 CCDC189A1A4V9 331 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 TMCO5BA8MYB1 307 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 WNT7AO00755 349 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 OPLAHO14841 1288 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 BUB1BO60566 1050 aaPredicted RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 RASSF9O75901 435 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 MBD4O95243 580 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 GLI1P08151 1106 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 ERCC3P19447 782 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 GCKP35557 465 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 PMS1P54277 932 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 SARNPP82979 210 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 ZBED6P86452 979 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 CFAP221Q4G0U5 840 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 CPLX4Q7Z7G2 160 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 KLHL7Q8IXQ5 586 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 ZNF654Q8IZM8 581 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 ARFGAP2Q8N6H7 521 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 CAVIN3Q969G5 261 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 RSRC1Q96IZ7 334 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 KRT12Q99456 494 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 NOC4LQ9BVI4 516 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 KRT23Q9C075 422 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 CNNM2Q9H8M5 875 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 ARMT1Q9H993 441 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 PIH1D3Q9NQM4 214 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 CNNM1Q9NRU3 951 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 FAM207AQ9NSI2 230 aaPredicted RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 KCNG1Q9UIX4 513 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 TPX2Q9ULW0 747 aaKnown RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 V9GY48 417 aaPredicted RBP5.6□□□□□ -1.51
HMG20A-204ENST00000558288 CNTNAP4Q9C0A0 1308 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 KCPQ6ZWJ8 1503 aa5.6□□□□□ -1.51
HMG20A-204ENST00000558288 A0A1W2PQC6 194 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms