RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 SART3Q15020 963 aaKnown RBP11.8□□□□□ -0.52
USP3-207ENST00000558218 KCNA10Q16322 511 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 GNASQ5JWF2 1037 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 TAPT1Q6NXT6 567 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 RASGRP2Q7LDG7 609 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 MCF2L2Q86YR7 1114 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 ADGRF4Q8IZF3 695 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 FERMT2Q96AC1 680 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 STARD7Q9NQZ5 370 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 GNEQ9Y223 722 aaKnown RBP11.8□□□□□ -0.52
USP3-207ENST00000558218 ATP11BQ9Y2G3 1177 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 ABCB11O95342 1321 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 MROH7Q68CQ1 1323 aa11.8□□□□□ -0.52
USP3-207ENST00000558218 RBM47A0AV96 593 aaKnown RBP11.79□□□□□ -0.52
USP3-207ENST00000558218 PTPDC1A2A3K4 754 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 DCDC2CA8MYV0 355 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 NFIBO00712 420 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 KIAA0355O15063 1070 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 ZEB2O60315 1214 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 C6orf222P0C671 652 aaPredicted RBP11.79□□□□□ -0.52
USP3-207ENST00000558218 GOLGA8HP0CJ92 632 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 CDK7P50613 346 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
USP3-207ENST00000558218 RPS6P62753 249 aaKnown RBP11.79□□□□□ -0.52
USP3-207ENST00000558218 TLE2Q04725 743 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 TRIM60Q495X7 471 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 BMP2KLQ5H9B9 411 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 RALYLQ86SE5 291 aaKnown RBP11.79□□□□□ -0.52
USP3-207ENST00000558218 TMTC2Q8N394 836 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 UBA5Q9GZZ9 404 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 AP5M1Q9H0R1 490 aa11.79□□□□□ -0.52
USP3-207ENST00000558218 MRPL11Q9Y3B7 192 aaKnown RBP11.79□□□□□ -0.52
USP3-207ENST00000558218 PALM3A6NDB9 673 aaPredicted RBP11.78□□□□□ -0.52
USP3-207ENST00000558218 KLRF2D3W0D1 207 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 E7EWF7 191 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 NKRFO15226 690 aaKnown RBP eCLIP11.78□□□□□ -0.52
USP3-207ENST00000558218 CTAGE5O15320 804 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 ASGR1P07306 291 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 CLTBP09497 229 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 EDNRBP24530 442 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 SMARCA1P28370 1054 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 CDC37Q16543 378 aaPredicted RBP11.78□□□□□ -0.52
USP3-207ENST00000558218 DUSP28Q4G0W2 176 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 NOL8Q76FK4 1167 aaKnown RBP11.78□□□□□ -0.52
USP3-207ENST00000558218 CYB5R4Q7L1T6 521 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 MTMR8Q96EF0 704 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 IWS1Q96ST2 819 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 AMNQ9BXJ7 453 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 PDLIM7Q9NR12 457 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 ASTN1O14525 1302 aa11.78□□□□□ -0.52
USP3-207ENST00000558218 A0A0U1RQG5 324 aaPredicted RBP11.77□□□□□ -0.53
USP3-207ENST00000558218 ARVCFO00192 962 aa11.77□□□□□ -0.53
USP3-207ENST00000558218 IFIT3O14879 490 aaKnown RBP11.77□□□□□ -0.53
USP3-207ENST00000558218 ADCY6O43306 1168 aa11.77□□□□□ -0.53
USP3-207ENST00000558218 SMPD1P17405 629 aa11.77□□□□□ -0.53
USP3-207ENST00000558218 CALML3P27482 149 aa11.77□□□□□ -0.53
USP3-207ENST00000558218 MDM2Q00987 491 aaPredicted RBP11.77□□□□□ -0.53
USP3-207ENST00000558218 GHRHRQ02643 423 aa11.77□□□□□ -0.53
USP3-207ENST00000558218 FSCN1Q16658 493 aaKnown RBP11.77□□□□□ -0.53
USP3-207ENST00000558218 FBXO11Q86XK2 927 aa11.77□□□□□ -0.53
USP3-207ENST00000558218 KCNV2Q8TDN2 545 aa11.77□□□□□ -0.53
USP3-207ENST00000558218 NSUN6Q8TEA1 469 aaKnown RBP11.77□□□□□ -0.53
USP3-207ENST00000558218 TRIM43BA6NCK2 446 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 ZBTB5O15062 677 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 DYNC1LI2O43237 492 aaPredicted RBP11.76□□□□□ -0.53
USP3-207ENST00000558218 DHX16O60231 1041 aaKnown RBP11.76□□□□□ -0.53
USP3-207ENST00000558218 KPNA6O60684 536 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 PDE4DQ08499 809 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 FAAP100Q0VG06 881 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 TROAPQ12815 778 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 GRM4Q14833 912 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 WTAPQ15007 396 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 QRICH1Q2TAL8 776 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 BRDTQ58F21 947 aaPredicted RBP11.76□□□□□ -0.53
USP3-207ENST00000558218 TLK2Q86UE8 772 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 SLC43A3Q8NBI5 491 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 IGDCC4Q8TDY8 1250 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 SCFD2Q8WU76 684 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 VTI1AQ96AJ9 217 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 TRIM43Q96BQ3 446 aaPredicted RBP11.76□□□□□ -0.53
USP3-207ENST00000558218 LENG1Q96BZ8 264 aaPredicted RBP11.76□□□□□ -0.53
USP3-207ENST00000558218 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 WDR11Q9BZH6 1224 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 RIOX1Q9H6W3 641 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 VAT1LQ9HCJ6 419 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 PDGFCQ9NRA1 345 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 TMEM39AQ9NV64 488 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
USP3-207ENST00000558218 RBM8AQ9Y5S9 174 aaKnown RBP11.76□□□□□ -0.53
USP3-207ENST00000558218 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.75□□□□□ -0.53
USP3-207ENST00000558218 MYADML2A6NDP7 307 aa11.75□□□□□ -0.53
USP3-207ENST00000558218 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
USP3-207ENST00000558218 TLR3O15455 904 aaKnown RBP11.75□□□□□ -0.53
USP3-207ENST00000558218 PQBP1O60828 265 aaKnown RBP11.75□□□□□ -0.53
USP3-207ENST00000558218 RAG1P15918 1043 aa11.75□□□□□ -0.53
USP3-207ENST00000558218 MCM5P33992 734 aa11.75□□□□□ -0.53
USP3-207ENST00000558218 CPT1AP50416 773 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms