RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 KIF5BP33176 963 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 METAP2P50579 478 aaKnown RBP eCLIP13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 RTN1Q16799 776 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 SYDE2Q5VT97 1194 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 FAM160B2Q86V87 743 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 PRPF38AQ8NAV1 312 aaKnown RBP13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 PIBF1Q8WXW3 757 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 POM121Q96HA1 1249 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 C1QTNF2Q9BXJ5 285 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 ALDH8A1Q9H2A2 487 aaPredicted RBP13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 ZCCHC17Q9NP64 241 aaKnown RBP13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 PPP1R9AQ9ULJ8 1098 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 PRR12Q9ULL5 1215 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 TPCN1Q9ULQ1 816 aa13.96□□□□□ -0.17
HMGB1P8-201ENST00000558211 PARP14Q460N5 1801 aa13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 TNFRSF10AO00220 468 aa13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 PLEKHA8P1O95397 391 aa13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 PLS1Q14651 629 aa13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 CPXCR1Q8N123 301 aa13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 ANKRD13CQ8N6S4 541 aa13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 EHBP1Q8NDI1 1231 aa13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 NCOA5Q9HCD5 579 aaKnown RBP13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 RLFQ13129 1914 aa13.95□□□□□ -0.18
HMGB1P8-201ENST00000558211 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 TLR2O60603 784 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 ZBED4O75132 1171 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 LARGE1O95461 756 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 CDC27P30260 824 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 ADD1P35611 737 aaKnown RBP13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 BTNL9Q6UXG8 535 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 NBPF11Q86T75 865 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 NECAB1Q8N987 351 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 ZNF274Q96GC6 653 aaPredicted RBP13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 MAP3K14Q99558 947 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 SLKQ9H2G2 1235 aaPredicted RBP13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 GDPD2Q9HCC8 539 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 TOR4AQ9NXH8 423 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 LIMCH1Q9UPQ0 1083 aa13.94□□□□□ -0.18
HMGB1P8-201ENST00000558211 VWA5AO00534 786 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 PLA2G6O60733 806 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 DTNBO60941 627 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 PPFIA3O75145 1194 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 GCLCP48506 637 aaPredicted RBP13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 GNAQP50148 359 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 EVCP57679 992 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 PTK2Q05397 1052 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 IRF5Q13568 498 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 ME3Q16798 604 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 HOMER1Q86YM7 354 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 JMYQ8N9B5 988 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 RAVER2Q9HCJ3 691 aaKnown RBP13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 TXNRD2Q9NNW7 524 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 PRM3Q9NNZ6 103 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 RBM28Q9NW13 759 aaKnown RBP13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 BTBD7Q9P203 1132 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 RBPJLQ9UBG7 517 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 MYH6P13533 1939 aa13.93□□□□□ -0.18
HMGB1P8-201ENST00000558211 MYPNQ86TC9 1320 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 CCDC196A0A1B0GTZ2 297 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 hCG_1642624A0A1W2PR95 340 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 SCRN1Q12765 414 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 TMEM132BQ14DG7 1078 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 SLC35G1Q2M3R5 365 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 C17orf99Q6UX52 265 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 LBX2Q6XYB7 198 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 TMTC3Q6ZXV5 915 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 GTF3C2Q8WUA4 911 aaPredicted RBP13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 ARHGAP9Q9BRR9 750 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 JMJD4Q9H9V9 463 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 RABGAP1Q9Y3P9 1069 aa13.92□□□□□ -0.18
HMGB1P8-201ENST00000558211 ADGRA2Q96PE1 1338 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 CPLX1O14810 134 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 CYTH3O43739 400 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 PFKFB2O60825 505 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 CNMDO75829 334 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 HSPA1AP0DMV8 641 aaKnown RBP13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 HSPA1BP0DMV9 641 aaKnown RBP13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 TAL1P17542 331 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 RCAN1P53805 252 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 ERVK-9P63128 1117 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 ERVK-24P63145 666 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 AGERQ15109 404 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 CDC37Q16543 378 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 WDR78Q5VTH9 848 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 CCAR1Q8IX12 1150 aaKnown RBP13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 MB21D1Q8N884 522 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 GPRC5AQ8NFJ5 357 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 ZSCAN31Q96LW9 406 aaPredicted RBP13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 PIGSQ96S52 555 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 LZTS2Q9BRK4 669 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 SLC38A10Q9HBR0 1119 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 ADAMTS5Q9UNA0 930 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 CEP350Q5VT06 3117 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 SMCHD1A6NHR9 2005 aa13.91□□□□□ -0.18
HMGB1P8-201ENST00000558211 ZBBXA8MT70 800 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms