RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 WDR11Q9BZH6 1224 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 BCL11AQ9H165 835 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 UBE2ZQ9H832 354 aaPredicted RBP6.17□□□□□ -1.42
SPG11-208ENST00000558155 A1CFQ9NQ94 594 aaKnown RBP6.17□□□□□ -1.42
SPG11-208ENST00000558155 RNF146Q9NTX7 359 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 MTMR4Q9NYA4 1195 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 ADD3Q9UEY8 706 aaKnown RBP6.17□□□□□ -1.42
SPG11-208ENST00000558155 CTNNA3Q9UI47 895 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 ISY1Q9ULR0 285 aaKnown RBP6.17□□□□□ -1.42
SPG11-208ENST00000558155 NOD1Q9Y239 953 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 FAM50BQ9Y247 325 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 DNAH12Q6ZR08 3092 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 ZNF536O15090 1300 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 ZBED9Q6R2W3 1325 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 MUC6Q6W4X9 2439 aa6.17□□□□□ -1.42
SPG11-208ENST00000558155 SCN5AQ14524 2016 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 PRUNE2Q8WUY3 3088 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 LOC102724159A0A0B4J2E5 919 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 IGKV6D-41A0A0C4DH26 115 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 B4DLN1 442 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 NKRFO15226 690 aaKnown RBP eCLIP6.16□□□□□ -1.42
SPG11-208ENST00000558155 PLA2G6O60733 806 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 EFCAB14O75071 495 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 HMMRO75330 724 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 KCNA5P22460 613 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 SLC1A4P43007 532 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 MRPL12P52815 198 aaKnown RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 ERVK-21P61565 698 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 NHLH1Q02575 133 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 PWP2Q15269 919 aaKnown RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 SLFNL1Q499Z3 407 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 PTCRAQ6ISU1 281 aaPredicted RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 RCSD1Q6JBY9 416 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 FBXO16Q8IX29 292 aaPredicted RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 OR6J1Q8NGC5 347 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 CAGE1Q8TC20 777 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 MORC4Q8TE76 937 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 CEP95Q96GE4 821 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 SNX27Q96L92 541 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 MFSD14AQ96MC6 490 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 TGS1Q96RS0 853 aaKnown RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 STRBPQ96SI9 672 aaKnown RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 MPHOSPH6Q99547 160 aaKnown RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 RAD9AQ99638 391 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 HAUS7Q99871 368 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 UPF3BQ9BZI7 483 aaKnown RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 PUS7LQ9H0K6 701 aaKnown RBP6.16□□□□□ -1.42
SPG11-208ENST00000558155 SUGCTQ9HAC7 445 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 CYP39A1Q9NYL5 469 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 PCDHGA4Q9Y5G9 962 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 MYH4Q9Y623 1939 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 RAD50Q92878 1312 aa6.16□□□□□ -1.42
SPG11-208ENST00000558155 CDH23Q9H251 3354 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 ABHD14A-ACY1A0A1B0GW23 586 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 RBM47A0AV96 593 aaKnown RBP6.15□□□□□ -1.42
SPG11-208ENST00000558155 GRXCR2A6NFK2 248 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 GSG1L2A8MUP6 293 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 DCXO43602 365 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 ARHGEF15O94989 841 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 APPP05067 770 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 SLC3A2P08195 630 aaKnown RBP6.15□□□□□ -1.42
SPG11-208ENST00000558155 TSPY3P0CV98 308 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 TSPY8P0CW00 308 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 GNAT2P19087 354 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 PTGS1P23219 599 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 MCCP23508 829 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 PDE4BQ07343 736 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 IKBKEQ14164 716 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 PTGISQ16647 500 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 PTPROQ16827 1216 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 TMEM63BQ5T3F8 832 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 CNKSR3Q6P9H4 555 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 NSMFQ6X4W1 530 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 LRRC47Q8N1G4 583 aaKnown RBP6.15□□□□□ -1.42
SPG11-208ENST00000558155 TET1Q8NFU7 2136 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 NEDD1Q8NHV4 660 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 AFAP1L1Q8TED9 768 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 GDPD5Q8WTR4 605 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 GMCL1Q96IK5 515 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 FBXL18Q96ME1 805 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 PRKAG3Q9UGI9 489 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 PNMA2Q9UL42 364 aa6.15□□□□□ -1.42
SPG11-208ENST00000558155 BDP1A6H8Y1 2624 aa6.15□□□□□ -1.43
SPG11-208ENST00000558155 PIEZO1Q92508 2521 aa6.15□□□□□ -1.43
SPG11-208ENST00000558155 EYSQ5T1H1 3165 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 A6NJR5 290 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 PATL2C9JE40 543 aaKnown RBP6.14□□□□□ -1.43
SPG11-208ENST00000558155 PRDM1O75626 825 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 GJB5O95377 273 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 IL9P15248 144 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 SELPP16109 830 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 TDO2P48775 406 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 ALDH5A1P51649 535 aaPredicted RBP6.14□□□□□ -1.43
SPG11-208ENST00000558155 CHMP4BP1P59074 171 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 WDR5P61964 334 aaKnown RBP6.14□□□□□ -1.43
SPG11-208ENST00000558155 TFAP4Q01664 338 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 PDE4DQ08499 809 aa6.14□□□□□ -1.43
SPG11-208ENST00000558155 BAATQ14032 418 aaPredicted RBP6.14□□□□□ -1.43
SPG11-208ENST00000558155 PPP2R5BQ15173 497 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms