RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 SLC35F1Q5T1Q4 408 aa7.76□□□□□ -1.17
GPHN-215ENST00000557654 OLFML2BQ68BL8 750 aa7.76□□□□□ -1.17
GPHN-215ENST00000557654 NLRP10Q86W26 655 aa7.76□□□□□ -1.17
GPHN-215ENST00000557654 C1QL4Q86Z23 238 aa7.76□□□□□ -1.17
GPHN-215ENST00000557654 RCBTB1Q8NDN9 531 aa7.76□□□□□ -1.17
GPHN-215ENST00000557654 PMFBP1Q8TBY8 1022 aa7.76□□□□□ -1.17
GPHN-215ENST00000557654 PANK1Q8TE04 598 aa7.76□□□□□ -1.17
GPHN-215ENST00000557654 AARSD1Q9BTE6 412 aaKnown RBP7.76□□□□□ -1.17
GPHN-215ENST00000557654 FAM221BA6H8Z2 402 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 N4BP3O15049 544 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 PRODHO43272 600 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 BCL6P41182 706 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 RBL2Q08999 1139 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 TMEM62Q0P6H9 643 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 SERINC3Q13530 473 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 HSP90AA2PQ14568 343 aaPredicted RBP7.75□□□□□ -1.17
GPHN-215ENST00000557654 E4F1Q66K89 784 aaPredicted RBP7.75□□□□□ -1.17
GPHN-215ENST00000557654 WWC2Q6AWC2 1192 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 IGDCC3Q8IVU1 814 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 LRRC56Q8IYG6 542 aaPredicted RBP7.75□□□□□ -1.17
GPHN-215ENST00000557654 MZB1Q8WU39 189 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 SGSM3Q96HU1 749 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 CCDC140Q96MF4 163 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 DNAJC2Q99543 621 aaKnown RBP7.75□□□□□ -1.17
GPHN-215ENST00000557654 HIRIP3Q9BW71 556 aaPredicted RBP7.75□□□□□ -1.17
GPHN-215ENST00000557654 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.75□□□□□ -1.17
GPHN-215ENST00000557654 PCDHA5Q9Y5H7 936 aa7.75□□□□□ -1.17
GPHN-215ENST00000557654 BLACEA4D250 179 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 C22orf46C9J442 243 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
GPHN-215ENST00000557654 PI3P19957 117 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 RPL11P62913 178 aaKnown RBP7.74□□□□□ -1.17
GPHN-215ENST00000557654 KCNAB2Q13303 367 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 MTERF2Q49AM1 385 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 ACBD5Q5T8D3 534 aaPredicted RBP7.74□□□□□ -1.17
GPHN-215ENST00000557654 NBPF6Q5VWK0 638 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 USP53Q70EK8 1073 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 CEP68Q76N32 757 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 CABP7Q86V35 215 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 KCTD13Q8WZ19 329 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 NBPF4Q96M43 638 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 SIRPGQ9P1W8 387 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 CNOT6Q9ULM6 557 aaKnown RBP7.74□□□□□ -1.17
GPHN-215ENST00000557654 PCDHA2Q9Y5H9 948 aa7.74□□□□□ -1.17
GPHN-215ENST00000557654 TIMM13Q9Y5L4 95 aaPredicted RBP7.74□□□□□ -1.17
GPHN-215ENST00000557654 IQCA1LA6NCM1 817 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 FBLN1P23142 703 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 LTBRP36941 435 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 MAP4K2Q12851 820 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 RASGRF1Q13972 1273 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 RASA3Q14644 834 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 SF3A1Q15459 793 aaKnown RBP7.73□□□□□ -1.17
GPHN-215ENST00000557654 IQCEQ6IPM2 695 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 OSBP2Q969R2 916 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 ARMC5Q96C12 935 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 TOX2Q96NM4 488 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 SPATA9Q9BWV2 254 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 CCDC113Q9H0I3 377 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 IRF2BPLQ9H1B7 796 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 EPB41L4AQ9HCS5 686 aaPredicted RBP7.73□□□□□ -1.17
GPHN-215ENST00000557654 KCTD3Q9Y597 815 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 IRAK3Q9Y616 596 aa7.73□□□□□ -1.17
GPHN-215ENST00000557654 NUAK1O60285 661 aa7.72□□□□□ -1.17
GPHN-215ENST00000557654 BUB1BO60566 1050 aaPredicted RBP7.72□□□□□ -1.17
GPHN-215ENST00000557654 MSCO60682 206 aa7.72□□□□□ -1.17
GPHN-215ENST00000557654 PABPC1P11940 636 aaKnown RBP7.72□□□□□ -1.17
GPHN-215ENST00000557654 MC3RP41968 323 aa7.72□□□□□ -1.17
GPHN-215ENST00000557654 FZD5Q13467 585 aa7.72□□□□□ -1.17
GPHN-215ENST00000557654 NTRK3Q16288 839 aa7.72□□□□□ -1.17
GPHN-215ENST00000557654 TMEFF1Q8IYR6 380 aa7.72□□□□□ -1.17
GPHN-215ENST00000557654 LRRC47Q8N1G4 583 aaKnown RBP7.72□□□□□ -1.17
GPHN-215ENST00000557654 NETO2Q8NC67 525 aa7.72□□□□□ -1.17
GPHN-215ENST00000557654 SREK1Q8WXA9 508 aaKnown RBP7.72□□□□□ -1.17
GPHN-215ENST00000557654 CHAMP1Q96JM3 812 aa7.72□□□□□ -1.17
GPHN-215ENST00000557654 SIGLEC10Q96LC7 697 aa7.72□□□□□ -1.17
GPHN-215ENST00000557654 TRAV20A0A0B4J274 112 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 IRS4O14654 1257 aaPredicted RBP7.71□□□□□ -1.18
GPHN-215ENST00000557654 ADCY3O60266 1144 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 FGFR1P11362 822 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 LIMS1P48059 325 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 SSRP1Q08945 709 aaKnown RBP7.71□□□□□ -1.18
GPHN-215ENST00000557654 TESK1Q15569 626 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 FOXB2Q5VYV0 432 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 KCNT2Q6UVM3 1135 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 NSMFQ6X4W1 530 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 LCNL1Q6ZST4 164 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 ALG3Q92685 438 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 TRMT2BQ96GJ1 504 aaKnown RBP7.71□□□□□ -1.18
GPHN-215ENST00000557654 DEPDC7Q96QD5 511 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 SNTG2Q9NY99 539 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 NPFFR2Q9Y5X5 522 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 IRS2Q9Y4H2 1338 aa7.71□□□□□ -1.18
GPHN-215ENST00000557654 MYO1BO43795 1136 aa7.7□□□□□ -1.18
GPHN-215ENST00000557654 ATF2P15336 505 aa7.7□□□□□ -1.18
GPHN-215ENST00000557654 PMLP29590 882 aa7.7□□□□□ -1.18
GPHN-215ENST00000557654 PEX11GQ96HA9 241 aa7.7□□□□□ -1.18
GPHN-215ENST00000557654 TMEM169Q96HH4 297 aa7.7□□□□□ -1.18
GPHN-215ENST00000557654 PHF20Q9BVI0 1012 aa7.7□□□□□ -1.18
GPHN-215ENST00000557654 PPARGC1AQ9UBK2 798 aaKnown RBP7.7□□□□□ -1.18
GPHN-215ENST00000557654 SGSM2O43147 1006 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms