RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 DDX19AQ9NUU7 478 aaKnown RBP11.65□□□□□ -0.54
GABRB3-212ENST00000557641 TMEM260Q9NX78 707 aa11.65□□□□□ -0.54
GABRB3-212ENST00000557641 PNMA3Q9UL41 463 aa11.65□□□□□ -0.54
GABRB3-212ENST00000557641 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.55
GABRB3-212ENST00000557641 FAM237AA0A1B0GTK4 181 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 OPLAHO14841 1288 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 ADAMTS3O15072 1205 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 CFBP00751 764 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 ALAS1P13196 640 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 MARCKSP29966 332 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-212ENST00000557641 SREBF1P36956 1147 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 HSD17B4P51659 736 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 PTGDRQ13258 359 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 LETM2Q2VYF4 491 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 AXDND1Q5T1B0 1012 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-212ENST00000557641 CST9Q5W186 159 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 USP17L6PQ6QN14 398 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
GABRB3-212ENST00000557641 CPXCR1Q8N123 301 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 FBXO40Q9UH90 709 aa11.64□□□□□ -0.55
GABRB3-212ENST00000557641 FBXO2Q9UK22 296 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-212ENST00000557641 ZNF214Q9UL59 606 aaPredicted RBP11.64□□□□□ -0.55
GABRB3-212ENST00000557641 CYP3A7-CYP3A51PA0A087WV96 503 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 NEMFO60524 1076 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 CCNT1O60563 726 aaKnown RBP11.63□□□□□ -0.55
GABRB3-212ENST00000557641 CYP3A4P08684 503 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 CYP3A7P24462 503 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 CIITAP33076 1130 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 MCM7P33993 719 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 GJA5P36382 358 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 LONP1P36776 959 aaKnown RBP11.63□□□□□ -0.55
GABRB3-212ENST00000557641 STAT3P40763 770 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 FAM160A1Q05DH4 1040 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 FMR1Q06787 632 aaKnown RBP eCLIP11.63□□□□□ -0.55
GABRB3-212ENST00000557641 MOGSQ13724 837 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 TREML2Q5T2D2 321 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 SPRYD7Q5W111 196 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 ANKRD23Q86SG2 305 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 C4orf32Q8N8J7 132 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 CHST13Q8NET6 341 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 CLEC4DQ8WXI8 215 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 TRERF1Q96PN7 1200 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 PYM1Q9BRP8 204 aaKnown RBP11.63□□□□□ -0.55
GABRB3-212ENST00000557641 ASCC2Q9H1I8 757 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-212ENST00000557641 FAM13BQ9NYF5 915 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 OTOFQ9HC10 1997 aa11.63□□□□□ -0.55
GABRB3-212ENST00000557641 PASKQ96RG2 1323 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 TBX3O15119 743 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 SLC25A27O95847 323 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 HUNKP57058 714 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 HERVK_113P62684 666 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 ARHGAP4P98171 946 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 TMEM132BQ14DG7 1078 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 CCDC183Q5T5S1 534 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 RESP18Q5W5W9 173 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 SNRNP48Q6IEG0 339 aaKnown RBP11.62□□□□□ -0.55
GABRB3-212ENST00000557641 GPAT2Q6NUI2 795 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 CAVIN1Q6NZI2 390 aaKnown RBP11.62□□□□□ -0.55
GABRB3-212ENST00000557641 DTHD1Q6ZMT9 781 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 FSIP1Q8NA03 581 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 CRYGNQ8WXF5 182 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 MBOAT7Q96N66 472 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
GABRB3-212ENST00000557641 ACAD9Q9H845 621 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 MYH15Q9Y2K3 1946 aa11.62□□□□□ -0.55
GABRB3-212ENST00000557641 CCL15-CCL14A0A0B4J2E2 113 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 WNT7AO00755 349 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 KIF3CO14782 793 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 CTAGE5O15320 804 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 HOXA13P31271 388 aaPredicted RBP11.61□□□□□ -0.55
GABRB3-212ENST00000557641 INHBEP58166 350 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 CCL15Q16663 113 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 Q4G0T1 1027 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 XRRA1Q6P2D8 792 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.61□□□□□ -0.55
GABRB3-212ENST00000557641 FCHSD1Q86WN1 690 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 RIOX2Q8IUF8 465 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 ENGASEQ8NFI3 743 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 TMC2Q8TDI7 906 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 CCDC34Q96HJ3 373 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 HHIPL1Q96JK4 782 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 AK8Q96MA6 479 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 TIGD1Q96MW7 591 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 RAB34Q9BZG1 259 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 ZCCHC17Q9NP64 241 aaKnown RBP11.61□□□□□ -0.55
GABRB3-212ENST00000557641 DACT1Q9NYF0 836 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 HPSEQ9Y251 543 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 LOC285556D6RIA3 1793 aa11.61□□□□□ -0.55
GABRB3-212ENST00000557641 TESPA1A2RU30 521 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-212ENST00000557641 MANSC4A6NHS7 340 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-212ENST00000557641 NFIBO00712 420 aa11.6□□□□□ -0.55
GABRB3-212ENST00000557641 KINO60870 393 aaKnown RBP11.6□□□□□ -0.55
GABRB3-212ENST00000557641 TOMM70O94826 608 aa11.6□□□□□ -0.55
GABRB3-212ENST00000557641 LIG1P18858 919 aa11.6□□□□□ -0.55
GABRB3-212ENST00000557641 TXLNAP40222 546 aa11.6□□□□□ -0.55
GABRB3-212ENST00000557641 GCLCP48506 637 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-212ENST00000557641 FSTL1Q12841 308 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms