RNA–Protein interactions for RNA: ENST00000557549.5

RBM23-231, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-231	ENST00000557549	ADD3	Q9UEY8	706 aa	Known RBP	14.27	□□□□□ -0.13
RBM23-231	ENST00000557549	RANBP2	P49792	3224 aa	Known RBP	14.27	□□□□□ -0.13
RBM23-231	ENST00000557549	KLF18	A0A0U1RQI7	1052 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549		B4DLN1	442 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	PPP1R11	O60927	126 aa	Predicted RBP	14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	SMPD1	P17405	629 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	MRPL12	P52815	198 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	BEX3	Q00994	111 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	RTN1	Q16799	776 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	C8orf34	Q49A92	452 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	GNAS	Q5JWF2	1037 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	TMTC3	Q6ZXV5	915 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	NOL8	Q76FK4	1167 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	MICU3	Q86XE3	530 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	TEX2	Q8IWB9	1127 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	DNER	Q8NFT8	737 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	BRF1	Q92994	677 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	MPHOSPH6	Q99547	160 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	UPF3A	Q9H1J1	476 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	SEC63	Q9UGP8	760 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	BRPF3	Q9ULD4	1205 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	GNE	Q9Y223	722 aa	Known RBP	14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	PCDHA1	Q9Y5I3	950 aa		14.26	□□□□□ -0.13
RBM23-231	ENST00000557549	ASGR1	P07306	291 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	CPA1	P15085	419 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	CST5	P28325	142 aa	Predicted RBP	14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	MDM2	Q00987	491 aa	Predicted RBP	14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	TLE2	Q04725	743 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	IQSEC1	Q6DN90	963 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	SRBD1	Q8N5C6	995 aa	Known RBP	14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	IL27	Q8NEV9	243 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	SYTL5	Q8TDW5	730 aa	Predicted RBP	14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	TAAR1	Q96RJ0	339 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	PIGS	Q96S52	555 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	SPC25	Q9HBM1	224 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	VTA1	Q9NP79	307 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	COL20A1	Q9P218	1284 aa		14.25	□□□□□ -0.13
RBM23-231	ENST00000557549	MOXD2P	A6NHM9	499 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	GOLGA8A	A7E2F4	631 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	GOLGA8B	A8MQT2	603 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	OPLAH	O14841	1288 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	DYNC1LI2	O43237	492 aa	Predicted RBP	14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	BMP8B	P34820	402 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	METAP2	P50579	478 aa	Known RBP eCLIP	14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	NKX3-2	P78367	333 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	C1orf53	Q5VUE5	145 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	SH3RF1	Q7Z6J0	888 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	HOMER1	Q86YM7	354 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	STARD7	Q9NQZ5	370 aa		14.24	□□□□□ -0.13
RBM23-231	ENST00000557549	RBM47	A0AV96	593 aa	Known RBP	14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	hCG_1984214	I3L0E3	225 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	PLEKHA8P1	O95397	391 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	ATXN8OS	P0DMR3	200 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	RXRA	P19793	462 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	EDNRB	P24530	442 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	HSD17B4	P51659	736 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	PDE4D	Q08499	809 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	APOBR	Q0VD83	1088 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	ANKRD1	Q15327	319 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	TLK2	Q86UE8	772 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	ZNF713	Q8N859	430 aa	Predicted RBP	14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	PCSK9	Q8NBP7	692 aa	Known RBP	14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	PIBF1	Q8WXW3	757 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	ZNF274	Q96GC6	653 aa	Predicted RBP	14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	WDR11	Q9BZH6	1224 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	AP5M1	Q9H0R1	490 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	PRDM5	Q9NQX1	630 aa	Predicted RBP	14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	PDLIM7	Q9NR12	457 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	PDRG1	Q9NUG6	133 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	GTF3C3	Q9Y5Q9	886 aa		14.23	□□□□□ -0.13
RBM23-231	ENST00000557549	TRIM43B	A6NCK2	446 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	ABCB7	O75027	752 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	SEC24B	O95487	1268 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	CFB	P00751	764 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	FUT2	Q10981	343 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	TOB2	Q14106	344 aa	Predicted RBP	14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	DUSP28	Q4G0W2	176 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	RAB11FIP4	Q86YS3	637 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	VTI1A	Q96AJ9	217 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	TRIM43	Q96BQ3	446 aa	Predicted RBP	14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	GLT1D1	Q96MS3	346 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	IWS1	Q96ST2	819 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	UPF3B	Q9BZI7	483 aa	Known RBP	14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	UBE2O	Q9C0C9	1292 aa	Known RBP	14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	FAM217B	Q9NTX9	383 aa	Predicted RBP	14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	PRKAG2	Q9UGJ0	569 aa		14.22	□□□□□ -0.13
RBM23-231	ENST00000557549	KIAA1217	Q5T5P2	1943 aa		14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	ELP1	O95163	1332 aa		14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	CNTNAP5	Q8WYK1	1306 aa		14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	LTBP2	Q14767	1821 aa		14.21	□□□□□ -0.13
RBM23-231	ENST00000557549		A0A1W2PPC1	479 aa		14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	SOX1	O00570	391 aa	Predicted RBP	14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	PQBP1	O60828	265 aa	Known RBP	14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	PDIA3	P30101	505 aa	Known RBP	14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	CDK7	P50613	346 aa		14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	FSCN1	Q16658	493 aa	Known RBP	14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	CXCL17	Q6UXB2	119 aa		14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	NSUN6	Q8TEA1	469 aa	Known RBP	14.21	□□□□□ -0.13
RBM23-231	ENST00000557549	COPS5	Q92905	334 aa		14.21	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms