RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 M0R296 226 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 BMP3P12645 472 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 ALAS1P13196 640 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 LTBRP36941 435 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 PPP2R5BQ15173 497 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 PWP2Q15269 919 aaKnown RBP12.39□□□□□ -0.43
TRAV33-201ENST00000557514 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 EPC2Q52LR7 807 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 TRIM67Q6ZTA4 783 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 ERC1Q8IUD2 1116 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 TMEM57Q8N5G2 664 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 CLUAP1Q96AJ1 413 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 CEP95Q96GE4 821 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 SAMD11Q96NU1 681 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 FAM86C1Q9NVL1 165 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 MTMR4Q9NYA4 1195 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 SLC4A4Q9Y6R1 1079 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 PLIN4Q96Q06 1357 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 ZFHX4Q86UP3 3567 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 PTPRSQ13332 1948 aa12.39□□□□□ -0.43
TRAV33-201ENST00000557514 COL4A6Q14031 1691 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 TMEM232C9JQI7 657 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 H3BNC9 293 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 NKRFO15226 690 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAV33-201ENST00000557514 TTLL1O95922 423 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 CHGBP05060 677 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 ALDH5A1P51649 535 aaPredicted RBP12.38□□□□□ -0.43
TRAV33-201ENST00000557514 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 SBK1Q52WX2 424 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 SLFN13Q68D06 897 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 GDF6Q6KF10 455 aaPredicted RBP12.38□□□□□ -0.43
TRAV33-201ENST00000557514 FAM117BQ6P1L5 589 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 TRAF7Q6Q0C0 670 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 RPAINQ86UA6 219 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 FAM160B2Q86V87 743 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
TRAV33-201ENST00000557514 GMCL1Q96IK5 515 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 CLDND1Q9NY35 253 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 ADD3Q9UEY8 706 aaKnown RBP12.38□□□□□ -0.43
TRAV33-201ENST00000557514 EXOC6BQ9Y2D4 811 aa12.38□□□□□ -0.43
TRAV33-201ENST00000557514 MBTPS2O43462 519 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 NCK2O43639 380 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 PLA2G6O60733 806 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 CKBP12277 381 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 SMAD4Q13485 552 aaKnown RBP12.37□□□□□ -0.43
TRAV33-201ENST00000557514 IKBKEQ14164 716 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 MBTPS1Q14703 1052 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 EP400NLQ6ZTU2 488 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 ERMP1Q7Z2K6 904 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 FBXO11Q86XK2 927 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 FBXL6Q8N531 539 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 PBXIP1Q96AQ6 731 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRAV33-201ENST00000557514 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 PAG1Q9NWQ8 432 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 FAM186AA6NE01 2351 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 SIP14410 1827 aa12.37□□□□□ -0.43
TRAV33-201ENST00000557514 DNAH14Q0VDD8 3507 aa12.36□□□□□ -0.43
TRAV33-201ENST00000557514 NCOR2Q9Y618 2525 aa12.36□□□□□ -0.43
TRAV33-201ENST00000557514 PROB1E7EW31 1015 aa12.36□□□□□ -0.43
TRAV33-201ENST00000557514 EDNRBP24530 442 aa12.36□□□□□ -0.43
TRAV33-201ENST00000557514 DLX2Q07687 328 aaPredicted RBP12.36□□□□□ -0.43
TRAV33-201ENST00000557514 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
TRAV33-201ENST00000557514 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRAV33-201ENST00000557514 SCFD2Q8WU76 684 aa12.36□□□□□ -0.43
TRAV33-201ENST00000557514 CHURC1Q8WUH1 139 aa12.36□□□□□ -0.43
TRAV33-201ENST00000557514 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
TRAV33-201ENST00000557514 MYH8P13535 1937 aa12.36□□□□□ -0.43
TRAV33-201ENST00000557514 RBAK-RBAKDNI3L0D1 243 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 TBX10O75333 385 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 VCPP55072 806 aaKnown RBP12.35□□□□□ -0.43
TRAV33-201ENST00000557514 GPM6BQ13491 265 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 BAATQ14032 418 aaPredicted RBP12.35□□□□□ -0.43
TRAV33-201ENST00000557514 CLUL1Q15846 466 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 TRIM71Q2Q1W2 868 aaKnown RBP12.35□□□□□ -0.43
TRAV33-201ENST00000557514 GIMAP6Q6P9H5 292 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 MYOCDQ8IZQ8 938 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 KAT2BQ92831 832 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 FRAT1Q92837 279 aaPredicted RBP12.35□□□□□ -0.43
TRAV33-201ENST00000557514 COPS5Q92905 334 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
TRAV33-201ENST00000557514 IRF2BPLQ9H1B7 796 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 GTF2IRD1Q9UHL9 959 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 CCPG1Q9ULG6 757 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 CACNA1BQ00975 2339 aa12.35□□□□□ -0.43
TRAV33-201ENST00000557514 DMXL1Q9Y485 3027 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 STXBP3O00186 592 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 NFIBO00712 420 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 LGR5O75473 907 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 ARIH2O95376 493 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 AMHP03971 560 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 ICAM1P05362 532 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 SLC1A4P43007 532 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 SNAP25P60880 206 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 ZXDAP98168 799 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 HYAL1Q12794 435 aa12.34□□□□□ -0.43
TRAV33-201ENST00000557514 IKQ13123 557 aaPredicted RBP12.34□□□□□ -0.43
TRAV33-201ENST00000557514 SLC30A10Q6XR72 485 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms