RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 HDXQ7Z353 690 aa19.75■□□□□ 0.75
XRCC3-218ENST00000557439 TBC1D16Q8TBP0 767 aa19.75■□□□□ 0.75
XRCC3-218ENST00000557439 HNRNPLLQ8WVV9 542 aaKnown RBP19.75■□□□□ 0.75
XRCC3-218ENST00000557439 PSMB7Q99436 277 aa19.75■□□□□ 0.75
XRCC3-218ENST00000557439 CUEDC2Q9H467 287 aa19.75■□□□□ 0.75
XRCC3-218ENST00000557439 KANSL2Q9H9L4 492 aa19.75■□□□□ 0.75
XRCC3-218ENST00000557439 TBC1D7Q9P0N9 293 aa19.75■□□□□ 0.75
XRCC3-218ENST00000557439 RAD21O60216 631 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 IL1R1P14778 569 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 SHROOM1Q2M3G4 852 aaPredicted RBP19.74■□□□□ 0.75
XRCC3-218ENST00000557439 C2CD5Q86YS7 1000 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 SNX29Q8TEQ0 813 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 LARP4BQ92615 738 aaKnown RBP19.74■□□□□ 0.75
XRCC3-218ENST00000557439 RIOX1Q9H6W3 641 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 MMRN2Q9H8L6 949 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 MLXIPQ9HAP2 919 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 ZNHIT6Q9NWK9 470 aaKnown RBP19.74■□□□□ 0.75
XRCC3-218ENST00000557439 MTMR4Q9NYA4 1195 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 SERPINB2P05120 415 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 LMAN1P49257 510 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 SCNN1DP51172 638 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 CACNB1Q02641 598 aaPredicted RBP19.74■□□□□ 0.75
XRCC3-218ENST00000557439 CDK5RAP3Q96JB5 506 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 FGFBP2Q9BYJ0 223 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 FAN1Q9Y2M0 1017 aa19.74■□□□□ 0.75
XRCC3-218ENST00000557439 CYLC1P35663 651 aaPredicted RBP19.73■□□□□ 0.75
XRCC3-218ENST00000557439 ADCY7P51828 1080 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 RAD51AP2Q09MP3 1159 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 TUBB2AQ13885 445 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 CNNM4Q6P4Q7 775 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 ANKRD13CQ8N6S4 541 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 NOC3LQ8WTT2 800 aaKnown RBP19.73■□□□□ 0.75
XRCC3-218ENST00000557439 TUBB2BQ9BVA1 445 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 SMARCAL1Q9NZC9 954 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 ARHGAP20Q9P2F6 1191 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 TAF1LQ8IZX4 1826 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 MYH10P35580 1976 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 KRT86O43790 486 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 KRT83P78385 493 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 CENPPQ6IPU0 288 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 KCTD1Q719H9 257 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 JADE2Q9NQC1 790 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 USP21Q9UK80 565 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 CAPN6Q9Y6Q1 641 aa19.73■□□□□ 0.75
XRCC3-218ENST00000557439 CCDC66A2RUB6 948 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 POTEB2H3BUK9 544 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 ERLIN1O75477 346 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 SSBP05455 408 aaKnown RBP eCLIP19.72■□□□□ 0.75
XRCC3-218ENST00000557439 AMPD3Q01432 767 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 APBA1Q02410 837 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 C2orf54Q08AI8 447 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 CCDC96Q2M329 555 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 DDX12PQ92771 950 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 CCDC102AQ96A19 550 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 NDST4Q9H3R1 872 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 MAGEF1Q9HAY2 307 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 FAM196BA6NMK8 535 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 GYS1P13807 737 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 ATP2B4P23634 1241 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 FKBP15Q5T1M5 1219 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 ZSCAN29Q8IWY8 852 aaPredicted RBP19.72■□□□□ 0.75
XRCC3-218ENST00000557439 CCDC42Q96M95 316 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 JMJD4Q9H9V9 463 aa19.72■□□□□ 0.75
XRCC3-218ENST00000557439 EIF3CLB5ME19 914 aaKnown RBP19.71■□□□□ 0.75
XRCC3-218ENST00000557439 MYBL2P10244 700 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 VWA3BQ502W6 1294 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 ADGRF4Q8IZF3 695 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 CAGE1Q8TC20 777 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 ERGIC2Q96RQ1 377 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 EIF3CQ99613 913 aaKnown RBP19.71■□□□□ 0.75
XRCC3-218ENST00000557439 EHD2Q9NZN4 543 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 SIK3Q9Y2K2 1263 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 IPO7O95373 1038 aaKnown RBP19.71■□□□□ 0.75
XRCC3-218ENST00000557439 MOCS3O95396 460 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 USP14P54578 494 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 PAPD7Q5XG87 772 aaKnown RBP19.71■□□□□ 0.75
XRCC3-218ENST00000557439 C15orf52Q6ZUT6 534 aaKnown RBP19.71■□□□□ 0.75
XRCC3-218ENST00000557439 UNC13DQ70J99 1090 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 RRAGAQ7L523 313 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 FAM114A1Q8IWE2 563 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 CERS5Q8N5B7 392 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 ZFP91Q96JP5 570 aaPredicted RBP19.71■□□□□ 0.75
XRCC3-218ENST00000557439 NUP58Q9BVL2 599 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 PODXL2Q9NZ53 605 aa19.71■□□□□ 0.75
XRCC3-218ENST00000557439 LRRC53A6NM62 1247 aa19.7■□□□□ 0.74
XRCC3-218ENST00000557439 USP17L10C9JJH3 530 aa19.7■□□□□ 0.74
XRCC3-218ENST00000557439 MPHOSPH10O00566 681 aaKnown RBP19.7■□□□□ 0.74
XRCC3-218ENST00000557439 CXCR5P32302 372 aa19.7■□□□□ 0.74
XRCC3-218ENST00000557439 EIF4A3P38919 411 aaKnown RBP19.7■□□□□ 0.74
XRCC3-218ENST00000557439 TNNT3P45378 269 aaPredicted RBP19.7■□□□□ 0.74
XRCC3-218ENST00000557439 CRY2Q49AN0 593 aa19.7■□□□□ 0.74
XRCC3-218ENST00000557439 RAD54LQ92698 747 aa19.7■□□□□ 0.74
XRCC3-218ENST00000557439 GAKO14976 1311 aa19.7■□□□□ 0.74
XRCC3-218ENST00000557439 NPHP3-ACAD11A0A0J9YXS1 232 aa19.7■□□□□ 0.74
XRCC3-218ENST00000557439 PLCG2P16885 1265 aa19.7■□□□□ 0.74
XRCC3-218ENST00000557439 EZH2Q15910 746 aaKnown RBP19.7■□□□□ 0.74
XRCC3-218ENST00000557439 LTBP4Q8N2S1 1624 aa19.7■□□□□ 0.74
XRCC3-218ENST00000557439 RIN2Q8WYP3 895 aaPredicted RBP19.7■□□□□ 0.74
XRCC3-218ENST00000557439 DOK7Q18PE1 504 aa19.69■□□□□ 0.74
XRCC3-218ENST00000557439 TMC4Q7Z404 712 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms