RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 FXR1P51114 621 aaKnown RBP eCLIP10□□□□□ -0.81
PPP4R3A-212ENST00000557382 GNG11P61952 73 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 MAP3K9P80192 1104 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 UBXN1Q04323 297 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 NFIAQ12857 509 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 FIGNQ5HY92 759 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 SLFN13Q68D06 897 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 CENPPQ6IPU0 288 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 ZNF662Q6ZS27 426 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 ZSCAN29Q8IWY8 852 aaPredicted RBP10□□□□□ -0.81
PPP4R3A-212ENST00000557382 GUF1Q8N442 669 aaKnown RBP10□□□□□ -0.81
PPP4R3A-212ENST00000557382 KCTD17Q8N5Z5 321 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 OR8K1Q8NGG5 319 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 LRRC15Q8TF66 581 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 C7orf43Q8WVR3 580 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 RAD54LQ92698 747 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 GMCL1Q96IK5 515 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 PNMA5Q96PV4 448 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 NUP88Q99567 741 aaPredicted RBP10□□□□□ -0.81
PPP4R3A-212ENST00000557382 DNAJC7Q99615 494 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 DUSP9Q99956 384 aaKnown RBP10□□□□□ -0.81
PPP4R3A-212ENST00000557382 TRIM34Q9BYJ4 488 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 VPS16Q9H269 839 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 ABHD10Q9NUJ1 306 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 FAM198AQ9UFP1 575 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 CAPN11Q9UMQ6 739 aa10□□□□□ -0.81
PPP4R3A-212ENST00000557382 A0A1W2PQJ5 194 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 SOWAHDA6NJG2 315 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 USP17L10C9JJH3 530 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 TBX3O15119 743 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 SLC37A4O43826 429 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 KIF5CO60282 957 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 PPP1R11O60927 126 aaPredicted RBP9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 URI1O94763 535 aaPredicted RBP9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 TDP2O95551 362 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 EEF2P13639 858 aaKnown RBP9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 SLC1A4P43007 532 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 TNNI2P48788 182 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 CDK17Q00537 523 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 LRRC63Q05C16 580 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 EHHADHQ08426 723 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 TTBK2Q6IQ55 1244 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 BTNL9Q6UXG8 535 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 RAD9BQ6WBX8 426 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 ARHGAP27Q6ZUM4 889 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 SLFN12Q8IYM2 578 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 CSGALNACT2Q8N6G5 542 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 MNS1Q8NEH6 495 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 KIFC2Q96AC6 838 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 ERGIC2Q96RQ1 377 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 MXD3Q9BW11 206 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 VPS33BQ9H267 617 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 DNAJC18Q9H819 358 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 DBNDD1Q9H9R9 158 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 OGFRQ9NZT2 677 aa9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 DDX25Q9UHL0 483 aaKnown RBP9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 LUC7L2Q9Y383 392 aaKnown RBP9.99□□□□□ -0.81
PPP4R3A-212ENST00000557382 TRIM49BA6NDI0 452 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 DDTLA6NHG4 134 aaPredicted RBP9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 MYMKA6NI61 221 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 TADA3O75528 432 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 H2AFXP16104 143 aaPredicted RBP9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 KRT9P35527 623 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 PMS1P54277 932 aaKnown RBP9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 EIF6P56537 245 aaKnown RBP9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 ICA1Q05084 483 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 STK4Q13043 487 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 PTPN21Q16825 1174 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 ABCB5Q2M3G0 1257 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 QRICH1Q2TAL8 776 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 ANKRD40Q6AI12 368 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 KIAA0825Q8IV33 1275 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 SNX29Q8TEQ0 813 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 CPLX3Q8WVH0 158 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 UBXN4Q92575 508 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 HAS1Q92839 578 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 PLIN2Q99541 437 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 TUBGCP2Q9BSJ2 902 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 AMNQ9BXJ7 453 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 BMP2KQ9NSY1 1161 aaPredicted RBP9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 ARGLU1Q9NWB6 273 aaPredicted RBP9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 HERC5Q9UII4 1024 aaKnown RBP9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 PCDHA12Q9UN75 941 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 MAPK8IP1Q9UQF2 711 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 MRFAP1Q9Y605 127 aa9.98□□□□□ -0.81
PPP4R3A-212ENST00000557382 ATP8B1O43520 1251 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 MARCH6O60337 910 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 KIF20AO95235 890 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 RBM5P52756 815 aaKnown RBP eCLIP9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 ERVK-24P63145 666 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 KRT83P78385 493 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 ZBED6P86452 979 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 ATP2B2Q01814 1243 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 MCM6Q14566 821 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 ELF2Q15723 593 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 CDC37Q16543 378 aaPredicted RBP9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 MEA1Q16626 185 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 Q4G0T1 1027 aa9.97□□□□□ -0.81
PPP4R3A-212ENST00000557382 FKBP15Q5T1M5 1219 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms