RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	SDS	P20132	328 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	EDNRB	P24530	442 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	ALDH5A1	P51649	535 aa	Predicted RBP	13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	PPIG	Q13427	754 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	DUSP28	Q4G0W2	176 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	AKNAD1	Q5T1N1	836 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	KIAA1211	Q6ZU35	1233 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TTC14	Q96N46	770 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	AP5M1	Q9H0R1	490 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CPVL	Q9H3G5	476 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	OSBPL3	Q9H4L5	887 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TOMM22	Q9NS69	142 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	NEDD4	P46934	1319 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	FOSL2	P15408	326 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	B4GALNT3	Q6L9W6	998 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	TMEM199	Q8N511	208 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	HERVK_113	Q902F9	699 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	TBC1D5	Q92609	795 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	TIFA	Q96CG3	184 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	WDR11	Q9BZH6	1224 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ZNF576	Q9H609	170 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	IL23A	Q9NPF7	189 aa		13.14	□□□□□ -0.31
HNRNPC-231	ENST00000557336	TRIM6-TRIM34	B2RNG4	842 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	TLR3	O15455	904 aa	Known RBP	13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	GOLGA8H	P0CJ92	632 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	HOXB3	P14651	431 aa	Predicted RBP	13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	CCL23	P55773	120 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	RPS6	P62753	249 aa	Known RBP	13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	PURA	Q00577	322 aa	Known RBP	13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	NUCB1	Q02818	461 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	MFSD6	Q6ZSS7	791 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	PPP1R13L	Q8WUF5	828 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	RILPL2	Q969X0	211 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ZKSCAN3	Q9BRR0	538 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	UBA5	Q9GZZ9	404 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	IL25	Q9H293	177 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	HIPK3	Q9H422	1215 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	WDR19	Q8NEZ3	1342 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	MYO9B	Q13459	2157 aa		13.13	□□□□□ -0.31
HNRNPC-231	ENST00000557336	LOC102724159	A0A0B4J2E5	919 aa		13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	PTPDC1	A2A3K4	754 aa		13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ARIH2	O95376	493 aa		13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	PC	P11498	1178 aa	Known RBP	13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	CALML3	P27482	149 aa		13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ADGRE1	Q14246	886 aa		13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	PWP2	Q15269	919 aa	Known RBP	13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	RNF207	Q6ZRF8	634 aa		13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	CHD1L	Q86WJ1	897 aa		13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ANKS1A	Q92625	1134 aa		13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	COPS5	Q92905	334 aa		13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	TRMT13	Q9NUP7	481 aa	Known RBP	13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ADD3	Q9UEY8	706 aa	Known RBP	13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336	YBX2	Q9Y2T7	364 aa	Known RBP	13.12	□□□□□ -0.31
HNRNPC-231	ENST00000557336		A6NJR5	290 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	RBAK-RBAKDN	I3L0D1	243 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	FGB	P02675	491 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	CYP2C9	P11712	490 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	CCDC62	Q6P9F0	684 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	OTOP2	Q7RTS6	562 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	DGKH	Q86XP1	1220 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	RGS22	Q8NE09	1264 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	SCLY	Q96I15	445 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	SEZ6L	Q9BYH1	1024 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	PRDM6	Q9NQX0	595 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	COL20A1	Q9P218	1284 aa		13.11	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ZNF213	O14771	459 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ZEB2	O60315	1214 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	KDM4A	O75164	1064 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	NBPF20	Q3BBV1	942 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	CWC27	Q6UX04	472 aa	Known RBP	13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ENAH	Q8N8S7	591 aa	Predicted RBP	13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	EXOC6	Q8TAG9	804 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ESR2	Q92731	530 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	CTAGE1	Q96RT6	745 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	PRDM12	Q9H4Q4	367 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ZSWIM5	Q9P217	1185 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	NCOR1	O75376	2440 aa		13.1	□□□□□ -0.31
HNRNPC-231	ENST00000557336	SCN10A	Q9Y5Y9	1956 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	AAMP	Q13685	434 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	USH1G	Q495M9	461 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	GPATCH4	Q5T3I0	446 aa	Known RBP	13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	ADGRF4	Q8IZF3	695 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	PNMA1	Q8ND90	353 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	DNER	Q8NFT8	737 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	OR6J1	Q8NGC5	347 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	TAAR1	Q96RJ0	339 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	NKX2-4	Q9H2Z4	354 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	RWDD1	Q9H446	243 aa	Predicted RBP	13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	RNF41	Q9H4P4	317 aa	Predicted RBP	13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	TSHZ2	Q9NRE2	1034 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	POLR3E	Q9NVU0	708 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336	TNKS	O95271	1327 aa		13.09	□□□□□ -0.31
HNRNPC-231	ENST00000557336		B4E1Z4	1266 aa		13.08	□□□□□ -0.32
HNRNPC-231	ENST00000557336	OPLAH	O14841	1288 aa		13.08	□□□□□ -0.32
HNRNPC-231	ENST00000557336	MYL3	P08590	195 aa		13.08	□□□□□ -0.32
HNRNPC-231	ENST00000557336	MYOG	P15173	224 aa		13.08	□□□□□ -0.32
HNRNPC-231	ENST00000557336	CPT1A	P50416	773 aa		13.08	□□□□□ -0.32
HNRNPC-231	ENST00000557336	RABGGTB	P53611	331 aa		13.08	□□□□□ -0.32

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