RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.25
LGMN-215ENST00000557315 RRP36Q96EU6 259 aaKnown RBP16.6■□□□□ 0.25
LGMN-215ENST00000557315 VTA1Q9NP79 307 aa16.6■□□□□ 0.25
LGMN-215ENST00000557315 PXMP2Q9NR77 195 aa16.6■□□□□ 0.25
LGMN-215ENST00000557315 LTBP2Q14767 1821 aa16.59■□□□□ 0.25
LGMN-215ENST00000557315 RGS20O76081 388 aa16.59■□□□□ 0.25
LGMN-215ENST00000557315 PSMA5P28066 241 aa16.59■□□□□ 0.25
LGMN-215ENST00000557315 CST5P28325 142 aaPredicted RBP16.59■□□□□ 0.25
LGMN-215ENST00000557315 PDIA3P30101 505 aaKnown RBP16.59■□□□□ 0.25
LGMN-215ENST00000557315 GJA9P57773 515 aa16.59■□□□□ 0.25
LGMN-215ENST00000557315 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
LGMN-215ENST00000557315 MCF2L2Q86YR7 1114 aa16.59■□□□□ 0.25
LGMN-215ENST00000557315 RMDN3Q96TC7 470 aa16.59■□□□□ 0.25
LGMN-215ENST00000557315 NCOA5Q9HCD5 579 aaKnown RBP16.59■□□□□ 0.25
LGMN-215ENST00000557315 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
LGMN-215ENST00000557315 PHF24Q9UPV7 400 aa16.59■□□□□ 0.25
LGMN-215ENST00000557315 EIF2AK2P19525 551 aaKnown RBP16.58■□□□□ 0.24
LGMN-215ENST00000557315 ANAPC15P60006 121 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 TNFAIP2Q03169 654 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 SNX17Q15036 470 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 PKN1Q16512 942 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 CCDC62Q6P9F0 684 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 COPS5Q92905 334 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 KIF2CQ99661 725 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 NR2E3Q9Y5X4 410 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 CYP46A1Q9Y6A2 500 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.24
LGMN-215ENST00000557315 STXBP3O00186 592 aa16.57■□□□□ 0.24
LGMN-215ENST00000557315 PIK3CDO00329 1044 aa16.57■□□□□ 0.24
LGMN-215ENST00000557315 PPFIA3O75145 1194 aa16.57■□□□□ 0.24
LGMN-215ENST00000557315 METAP2P50579 478 aaKnown RBP eCLIP16.57■□□□□ 0.24
LGMN-215ENST00000557315 BEX3Q00994 111 aa16.57■□□□□ 0.24
LGMN-215ENST00000557315 CHRDL2Q6WN34 429 aa16.57■□□□□ 0.24
LGMN-215ENST00000557315 ARRDC4Q8NCT1 418 aa16.57■□□□□ 0.24
LGMN-215ENST00000557315 NSUN6Q8TEA1 469 aaKnown RBP16.57■□□□□ 0.24
LGMN-215ENST00000557315 ZFP91Q96JP5 570 aaPredicted RBP16.57■□□□□ 0.24
LGMN-215ENST00000557315 SENP6Q9GZR1 1112 aaPredicted RBP16.57■□□□□ 0.24
LGMN-215ENST00000557315 SCN10AQ9Y5Y9 1956 aa16.57■□□□□ 0.24
LGMN-215ENST00000557315 A0A1W2PQ45 241 aaPredicted RBP16.56■□□□□ 0.24
LGMN-215ENST00000557315 A0A1W2PQY0 241 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 GCOM1H8Y6P7 765 aaPredicted RBP16.56■□□□□ 0.24
LGMN-215ENST00000557315 NR3C2P08235 984 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 POLR2MP0CAP2 368 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 MRPS9P82933 396 aaKnown RBP16.56■□□□□ 0.24
LGMN-215ENST00000557315 PDE4DQ08499 809 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 PGM5Q15124 567 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 DUSP28Q4G0W2 176 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 IQSEC1Q6DN90 963 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 SYNE3Q6ZMZ3 975 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 TLK2Q86UE8 772 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 SAMD3Q8N6K7 520 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 FERMT2Q96AC1 680 aa16.56■□□□□ 0.24
LGMN-215ENST00000557315 MAP3K20Q9NYL2 800 aaKnown RBP16.56■□□□□ 0.24
LGMN-215ENST00000557315 V9GY48 417 aaPredicted RBP16.56■□□□□ 0.24
LGMN-215ENST00000557315 DTNBO60941 627 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 LARGE1O95461 756 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 ACLYP53396 1101 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 ATN1P54259 1190 aaPredicted RBP16.55■□□□□ 0.24
LGMN-215ENST00000557315 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
LGMN-215ENST00000557315 KCNA10Q16322 511 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 UBE2SQ16763 222 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 PHKBQ93100 1093 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 IWS1Q96ST2 819 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 WDR11Q9BZH6 1224 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 ALDH8A1Q9H2A2 487 aaPredicted RBP16.55■□□□□ 0.24
LGMN-215ENST00000557315 PDRG1Q9NUG6 133 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 SEC63Q9UGP8 760 aaKnown RBP16.55■□□□□ 0.24
LGMN-215ENST00000557315 TPCN1Q9ULQ1 816 aa16.55■□□□□ 0.24
LGMN-215ENST00000557315 KBTBD13C9JR72 458 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
LGMN-215ENST00000557315 C6orf222P0C671 652 aaPredicted RBP16.54■□□□□ 0.24
LGMN-215ENST00000557315 FGD1P98174 961 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 ST3GAL1Q11201 340 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 SEMA3FQ13275 785 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 ARHGEF16Q5VV41 709 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 SLC39A5Q6ZMH5 540 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 HEATR3Q7Z4Q2 680 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 RNF180Q86T96 592 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 C7orf61Q8IZ16 206 aa16.54■□□□□ 0.24
LGMN-215ENST00000557315 TSEN34Q9BSV6 310 aaKnown RBP16.54■□□□□ 0.24
LGMN-215ENST00000557315 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
LGMN-215ENST00000557315 GRIN2DO15399 1336 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 DYNC1LI2O43237 492 aaPredicted RBP16.53■□□□□ 0.24
LGMN-215ENST00000557315 ASGR1P07306 291 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 IFNAR1P17181 557 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 AK2P54819 239 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 RTP1P59025 263 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 ARHGAP1Q07960 439 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 TRAF1Q13077 416 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 PPP2R5BQ15173 497 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 PFKFB3Q16875 520 aaPredicted RBP16.53■□□□□ 0.24
LGMN-215ENST00000557315 SCFD2Q8WU76 684 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 ZNF274Q96GC6 653 aaPredicted RBP16.53■□□□□ 0.24
LGMN-215ENST00000557315 PRO3102Q9H379 93 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 BCAS3Q9H6U6 928 aa16.53■□□□□ 0.24
LGMN-215ENST00000557315 BARHL2Q9NY43 387 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms