RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 CCDC136Q96JN2 1154 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 PHAXQ9H814 394 aaKnown RBP7.41□□□□□ -1.22
FOXN3-215ENST00000557261 TRPC5Q9UL62 973 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-215ENST00000557261 SLC6A14Q9UN76 642 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 SPATA31A1Q5TZJ5 1347 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 BCL9O00512 1426 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 ATP10DQ9P241 1426 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 BCL9LQ86UU0 1499 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 NHSQ6T4R5 1651 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 NUP188Q5SRE5 1749 aa7.41□□□□□ -1.22
FOXN3-215ENST00000557261 TRBV23-1A0A0A0MS06 115 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 PRAMEF27A3QJZ7 478 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 BTBD11A6QL63 1104 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 PRPF3O43395 683 aaKnown RBP7.4□□□□□ -1.22
FOXN3-215ENST00000557261 LIG1P18858 919 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 EPHB1P54762 984 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 CDCP2Q5VXM1 449 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 ZNF385CQ66K41 422 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-215ENST00000557261 CENPQQ7L2Z9 268 aaPredicted RBP7.4□□□□□ -1.22
FOXN3-215ENST00000557261 C12orf40Q86WS4 652 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 CCAR1Q8IX12 1150 aaKnown RBP7.4□□□□□ -1.22
FOXN3-215ENST00000557261 TMEM192Q8IY95 271 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 TRIM22Q8IYM9 498 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 MICALL1Q8N3F8 863 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 CDC6Q99741 560 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 LPIN3Q9BQK8 851 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 RUSC1Q9BVN2 902 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 STK31Q9BXU1 1019 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 EFCC1Q9HA90 598 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 APEX2Q9UBZ4 518 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 KLF15Q9UIH9 416 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 USP21Q9UK80 565 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 SPATA31A5Q5VU36 1347 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 SPATA31A7Q8IWB4 1347 aa7.4□□□□□ -1.22
FOXN3-215ENST00000557261 ARFGEF2Q9Y6D5 1785 aa7.4□□□□□ -1.23
FOXN3-215ENST00000557261 COL5A3P25940 1745 aaPredicted RBP7.39□□□□□ -1.23
FOXN3-215ENST00000557261 TJP1Q07157 1748 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 ATRNO75882 1429 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 AKAP10O43572 662 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 RASGRP1O95267 797 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 PMLP29590 882 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 GRK4P32298 578 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 PPP2R2AP63151 447 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 UBE4AQ14139 1066 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 ZNF460Q14592 562 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 VPS72Q15906 364 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 SEPT7Q16181 437 aaKnown RBP7.39□□□□□ -1.23
FOXN3-215ENST00000557261 FNDC3BQ53EP0 1204 aaKnown RBP7.39□□□□□ -1.23
FOXN3-215ENST00000557261 SYCP2LQ5T4T6 812 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 INTS3Q68E01 1043 aaKnown RBP7.39□□□□□ -1.23
FOXN3-215ENST00000557261 ZNF790Q6PG37 636 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 SLC7A14Q8TBB6 771 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 COG1Q8WTW3 980 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 FRAT1Q92837 279 aaPredicted RBP7.39□□□□□ -1.23
FOXN3-215ENST00000557261 ACSF2Q96CM8 615 aaPredicted RBP7.39□□□□□ -1.23
FOXN3-215ENST00000557261 RTFDC1Q9BY42 306 aaPredicted RBP7.39□□□□□ -1.23
FOXN3-215ENST00000557261 NRSN2Q9GZP1 204 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 LGR6Q9HBX8 967 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 OSGEPQ9NPF4 335 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 GEMIN8Q9NWZ8 242 aaKnown RBP7.39□□□□□ -1.23
FOXN3-215ENST00000557261 NOB1Q9ULX3 412 aaKnown RBP7.39□□□□□ -1.23
FOXN3-215ENST00000557261 MAPRE3Q9UPY8 281 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 SLC12A7Q9Y666 1083 aa7.39□□□□□ -1.23
FOXN3-215ENST00000557261 BLACEA4D250 179 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 IQCA1LA6NCM1 817 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 C9IYK1 514 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 PRODHO43272 600 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 ADAMTS2O95450 1211 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 ITGAVP06756 1048 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 ARAFP10398 606 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 AP3B2Q13367 1082 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 PKN3Q6P5Z2 889 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 ELMSAN1Q6PJG2 1045 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 CYFIP1Q7L576 1253 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 FGD2Q7Z6J4 655 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 UNC5CLQ8IV45 518 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 PANK1Q8TE04 598 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 WHAMMQ8TF30 809 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 DDX1Q92499 740 aaKnown RBP7.38□□□□□ -1.23
FOXN3-215ENST00000557261 MTMR8Q96EF0 704 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 FGD4Q96M96 766 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 ZIM2Q9NZV7 527 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 ATXN7L1Q9ULK2 861 aaPredicted RBP7.38□□□□□ -1.23
FOXN3-215ENST00000557261 SBF2Q86WG5 1849 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 ANKRD36CQ5JPF3 1778 aa7.38□□□□□ -1.23
FOXN3-215ENST00000557261 TRAV20A0A0B4J274 112 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 EPHX1P07099 455 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 MAOBP27338 520 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 CDC27P30260 824 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 ID4P47928 161 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 CCT4P50991 539 aaKnown RBP7.37□□□□□ -1.23
FOXN3-215ENST00000557261 HDAC1Q13547 482 aaPredicted RBP7.37□□□□□ -1.23
FOXN3-215ENST00000557261 HDXQ7Z353 690 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 ZNF513Q8N8E2 541 aaPredicted RBP7.37□□□□□ -1.23
FOXN3-215ENST00000557261 RIN3Q8TB24 985 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 OSBP2Q969R2 916 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 SLC6A18Q96N87 628 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 FMNL2Q96PY5 1086 aa7.37□□□□□ -1.23
FOXN3-215ENST00000557261 YIPF4Q9BSR8 244 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms