RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 TMEM132EQ6IEE7 984 aa6.5□□□□□ -1.37
ATXN3-246ENST00000557030 PAQR3Q6TCH7 311 aa6.5□□□□□ -1.37
ATXN3-246ENST00000557030 MZB1Q8WU39 189 aa6.5□□□□□ -1.37
ATXN3-246ENST00000557030 SIGLEC10Q96LC7 697 aa6.5□□□□□ -1.37
ATXN3-246ENST00000557030 MMP19Q99542 508 aa6.5□□□□□ -1.37
ATXN3-246ENST00000557030 NKX2-4Q9H2Z4 354 aa6.5□□□□□ -1.37
ATXN3-246ENST00000557030 CYP26B1Q9NR63 512 aa6.5□□□□□ -1.37
ATXN3-246ENST00000557030 TARBP1Q13395 1621 aaKnown RBP6.5□□□□□ -1.37
ATXN3-246ENST00000557030 ARNTLO00327 626 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 KCNH1O95259 989 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 NAT2P11245 290 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 PAMP19021 973 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 SEPHS1P49903 392 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 MBLAC2Q68D91 279 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 GTF2IRD2BQ6EKJ0 949 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 CIAPIN1Q6FI81 312 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 POMZP3Q6PJE2 187 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 ANKS3Q6ZW76 656 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 TMC6Q7Z403 805 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 GTF2IRD2Q86UP8 949 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 NPLOC4Q8TAT6 608 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 PPP1R14AQ96A00 147 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 DACT3Q96B18 629 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-246ENST00000557030 LGR4Q9BXB1 951 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 TANGO6Q9C0B7 1094 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 CNOT6Q9ULM6 557 aaKnown RBP6.49□□□□□ -1.37
ATXN3-246ENST00000557030 KCTD3Q9Y597 815 aa6.49□□□□□ -1.37
ATXN3-246ENST00000557030 PCF11O94913 1555 aaKnown RBP6.48□□□□□ -1.37
ATXN3-246ENST00000557030 GAPVD1Q14C86 1478 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 TRBV23OR9-2A0A075B6M9 112 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 C7orf72A4D263 438 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 TBX1O43435 398 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 KLF4O43474 513 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 SUSD5O60279 629 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 DDAH1O94760 285 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 SCG5P05408 212 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 SCRN1Q12765 414 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 TESK1Q15569 626 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 ZC3H14Q6PJT7 736 aaKnown RBP6.48□□□□□ -1.37
ATXN3-246ENST00000557030 CRACR2BQ8N4Y2 399 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-246ENST00000557030 FRS2Q8WU20 508 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 GPRC5CQ9NQ84 441 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 ST7Q9NRC1 585 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 PPP1R1BQ9UD71 204 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-246ENST00000557030 PLA2G2DQ9UNK4 145 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 HCFC2Q9Y5Z7 792 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 EFCAB5A4FU69 1503 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 FHOD3Q2V2M9 1422 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 CTTNBP2Q8WZ74 1663 aa6.48□□□□□ -1.37
ATXN3-246ENST00000557030 AQRO60306 1485 aaKnown RBP eCLIP6.47□□□□□ -1.37
ATXN3-246ENST00000557030 LRRC9Q6ZRR7 1453 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 CCNB3Q8WWL7 1395 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 CFAP43Q8NDM7 1665 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 A0A1W2PQ27 194 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 A0A1W2PQ64 194 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 A0A1W2PQC6 194 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 A0A1W2PQD8 194 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 NUAK1O60285 661 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 STK10O94804 968 aaKnown RBP6.47□□□□□ -1.37
ATXN3-246ENST00000557030 ITGAVP06756 1048 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 THBDP07204 575 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 FXNQ16595 210 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 ZNF385BQ569K4 471 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 ZNF227Q86WZ6 799 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 CPNE8Q86YQ8 564 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 KREMEN2Q8NCW0 462 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 PANK1Q8TE04 598 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 DPF3Q92784 378 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 IRF2BPLQ9H1B7 796 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 IRAK3Q9Y616 596 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 FHAD1B1AJZ9 1412 aa6.47□□□□□ -1.37
ATXN3-246ENST00000557030 NPHP3-ACAD11A0A0J9YXS1 232 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 NOP56O00567 594 aaKnown RBP6.46□□□□□ -1.38
ATXN3-246ENST00000557030 GJB6O95452 261 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 PLS3P13797 630 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 PI3P19957 117 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 TACR1P25103 407 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 CAP1Q01518 475 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 BICRALQ6AI39 1079 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 FAM129CQ86XR2 697 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 CELF2-AS1Q8N7Q2 184 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 PLEKHO2Q8TD55 490 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 CASKIN1Q8WXD9 1431 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATXN3-246ENST00000557030 CLEC1BQ9P126 229 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 FYCO1Q9BQS8 1478 aa6.46□□□□□ -1.38
ATXN3-246ENST00000557030 PHLDB1Q86UU1 1377 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 SAMD9Q5K651 1589 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 ATP2B1P20020 1258 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 HOXC12P31275 282 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 GTF2F1P35269 517 aaKnown RBP eCLIP6.45□□□□□ -1.38
ATXN3-246ENST00000557030 ZNF200P98182 395 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-246ENST00000557030 INF2Q27J81 1249 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 LZTR1Q8N653 840 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 NETO2Q8NC67 525 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 BTN2A2Q8WVV5 523 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 TSPAN17Q96FV3 270 aa6.45□□□□□ -1.38
ATXN3-246ENST00000557030 C1orf159Q96HA4 380 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms