RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 CTAGE5O15320 804 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 DYNC1LI2O43237 492 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-245ENST00000556958 CIAO1O76071 339 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 PARNO95453 639 aaKnown RBP7.02□□□□□ -1.29
ATXN3-245ENST00000556958 MCAMP43121 646 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 SLC4A3P48751 1232 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 WDR5P61964 334 aaKnown RBP7.02□□□□□ -1.29
ATXN3-245ENST00000556958 MVPQ14764 893 aaKnown RBP7.02□□□□□ -1.29
ATXN3-245ENST00000556958 TTC6Q86TZ1 520 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 RPAINQ86UA6 219 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 CYP4X1Q8N118 509 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 ZSCAN1Q8NBB4 408 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 CHAMP1Q96JM3 812 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 RIPOR3Q96MK2 946 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 PCGF6Q9BYE7 350 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 DLL3Q9NYJ7 618 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 SERPINB13Q9UIV8 391 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 CD207Q9UJ71 328 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 Q9Y3F1 56 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 ZFHX4Q86UP3 3567 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 DOCK1Q14185 1865 aa7.02□□□□□ -1.29
ATXN3-245ENST00000556958 FLT1P17948 1338 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 BRWD1Q9NSI6 2320 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 LOC730098B7Z3J9 87 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 H3BNC9 293 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 LMNAP02545 664 aaKnown RBP7.01□□□□□ -1.29
ATXN3-245ENST00000556958 LTBRP36941 435 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 IL15P40933 162 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-245ENST00000556958 GPM6BQ13491 265 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 IKBKEQ14164 716 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-245ENST00000556958 CLUL1Q15846 466 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 KIAA0319Q5VV43 1072 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 NAA16Q6N069 864 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-245ENST00000556958 ATG9AQ7Z3C6 839 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 CERS3Q8IU89 383 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 KIAA2013Q8IYS2 634 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 CCDC155Q8N6L0 562 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 ZNF384Q8TF68 577 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.01□□□□□ -1.29
ATXN3-245ENST00000556958 EHD4Q9H223 541 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 SH2D4AQ9H788 454 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 TRMT13Q9NUP7 481 aaKnown RBP7.01□□□□□ -1.29
ATXN3-245ENST00000556958 POLR3EQ9NVU0 708 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 AATFQ9NY61 560 aaKnown RBP eCLIP7.01□□□□□ -1.29
ATXN3-245ENST00000556958 SAP30BPQ9UHR5 308 aaKnown RBP7.01□□□□□ -1.29
ATXN3-245ENST00000556958 ADAMTS5Q9UNA0 930 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 AKAP2Q9Y2D5 859 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 AK9Q5TCS8 1911 aa7.01□□□□□ -1.29
ATXN3-245ENST00000556958 DNAJC25-GNG10A0A024R161 153 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 ACTN4O43707 911 aaKnown RBP7□□□□□ -1.29
ATXN3-245ENST00000556958 IGSF3O75054 1194 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 VAMP4O75379 141 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 OATP04181 439 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 ICAM3P32942 547 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 TIMM10P62072 90 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 PSMC6P62333 389 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 SEPT2Q15019 361 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 EPC2Q52LR7 807 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 IQSEC1Q6DN90 963 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 CNKSR3Q6P9H4 555 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 ZBTB33Q86T24 672 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 TLK2Q86UE8 772 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 SPATA5Q8NB90 893 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 PPP2R3CQ969Q6 453 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 C17orf80Q9BSJ5 609 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 SH2B1Q9NRF2 756 aaPredicted RBP7□□□□□ -1.29
ATXN3-245ENST00000556958 TECTAO75443 2155 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 DCHS1Q96JQ0 3298 aa7□□□□□ -1.29
ATXN3-245ENST00000556958 MYH3P11055 1940 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 EP300Q09472 2414 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-245ENST00000556958 A0A1W2PRG0 241 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 VWA5AO00534 786 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 MPHOSPH10O00566 681 aaKnown RBP6.99□□□□□ -1.29
ATXN3-245ENST00000556958 WDR46O15213 610 aaKnown RBP6.99□□□□□ -1.29
ATXN3-245ENST00000556958 ADCY6O43306 1168 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 EYA4O95677 639 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 ADORA1P30542 326 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 GMPRP36959 345 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 RFX5P48382 616 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-245ENST00000556958 DEFB103AP81534 67 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 PTPN21Q16825 1174 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-245ENST00000556958 FAM47CQ5HY64 1035 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 GORABQ5T7V8 394 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 TBC1D9Q6ZT07 1266 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 ARMCX2Q7L311 632 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 TMCO2Q7Z6W1 182 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-245ENST00000556958 ANKRD35Q8N283 1001 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 AFAP1L1Q8TED9 768 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 HAUS7Q99871 368 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 HINFPQ9BQA5 517 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 PHF7Q9BWX1 381 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-245ENST00000556958 TEX13BQ9BXU2 312 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 LMAN2LQ9H0V9 348 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 KDM4CQ9H3R0 1056 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 ARHGEF10LQ9HCE6 1279 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 HMG20BQ9P0W2 317 aa6.99□□□□□ -1.29
ATXN3-245ENST00000556958 FBXO40Q9UH90 709 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms