RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 USP53Q70EK8 1073 aa6.17□□□□□ -1.42
FCF1-208ENST00000556814 ZSWIM9Q86XI8 627 aa6.17□□□□□ -1.42
FCF1-208ENST00000556814 SYNPOQ8N3V7 929 aa6.17□□□□□ -1.42
FCF1-208ENST00000556814 RNPC3Q96LT9 517 aaKnown RBP6.17□□□□□ -1.42
FCF1-208ENST00000556814 IMPACTQ9P2X3 320 aa6.17□□□□□ -1.42
FCF1-208ENST00000556814 ACSL6Q9UKU0 697 aa6.17□□□□□ -1.42
FCF1-208ENST00000556814 MRPS23Q9Y3D9 190 aaKnown RBP6.17□□□□□ -1.42
FCF1-208ENST00000556814 A0A1W2PQJ5 194 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 TLDC2A0PJX2 215 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 C7orf72A4D263 438 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 APPP05067 770 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 GLI1P08151 1106 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 PNLIPP16233 465 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 PRKCAP17252 672 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 TRHRP34981 398 aaPredicted RBP6.16□□□□□ -1.42
FCF1-208ENST00000556814 CEBPAP49715 358 aaPredicted RBP6.16□□□□□ -1.42
FCF1-208ENST00000556814 CYP4F8P98187 520 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 FOXB2Q5VYV0 432 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 SYDE1Q6ZW31 735 aaPredicted RBP6.16□□□□□ -1.42
FCF1-208ENST00000556814 NLRX1Q86UT6 975 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 HOMER1Q86YM7 354 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 NUP43Q8NFH3 380 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 KISS1RQ969F8 398 aaPredicted RBP6.16□□□□□ -1.42
FCF1-208ENST00000556814 EXOC2Q96KP1 924 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 ZFYVE21Q9BQ24 234 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 SLC6A17Q9H1V8 727 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 KCNK12Q9HB15 430 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 PDLIM7Q9NR12 457 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 GPR27Q9NS67 375 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 TMEM260Q9NX78 707 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 TIMM13Q9Y5L4 95 aaPredicted RBP6.16□□□□□ -1.42
FCF1-208ENST00000556814 NPFFR2Q9Y5X5 522 aa6.16□□□□□ -1.42
FCF1-208ENST00000556814 NOTOA8MTQ0 251 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 NAT1P18440 290 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 RPL11P62913 178 aaKnown RBP6.15□□□□□ -1.42
FCF1-208ENST00000556814 GABREP78334 506 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 TIGD5Q53EQ6 642 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 FYB2Q5VWT5 728 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 DENND5AQ6IQ26 1287 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 STYK1Q6J9G0 422 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 MAMDC2Q7Z304 686 aaPredicted RBP6.15□□□□□ -1.42
FCF1-208ENST00000556814 GGNQ86UU5 652 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 CABP7Q86V35 215 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 ANKLE2Q86XL3 938 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 CCDC103Q8IW40 242 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 APPBP2Q92624 585 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 PTPRN2Q92932 1015 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 PLCD4Q9BRC7 762 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 RNF32Q9H0A6 362 aa6.15□□□□□ -1.42
FCF1-208ENST00000556814 YBX2Q9Y2T7 364 aaKnown RBP6.15□□□□□ -1.42
FCF1-208ENST00000556814 MRPL42Q9Y6G3 142 aaKnown RBP6.15□□□□□ -1.42
FCF1-208ENST00000556814 AQP7O14520 342 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 EFCAB14O75071 495 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 SQSTM1Q13501 440 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 GIMAP6Q6P9H5 292 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 PRR23BQ6ZRT6 265 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 JAZF1Q86VZ6 243 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 AMIGO3Q86WK7 504 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 LZTR1Q8N653 840 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 RCBTB1Q8NDN9 531 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 SHISA4Q96DD7 197 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 PHF20Q9BVI0 1012 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.14□□□□□ -1.43
FCF1-208ENST00000556814 TMEFF2Q9UIK5 374 aaPredicted RBP6.14□□□□□ -1.43
FCF1-208ENST00000556814 TBX22Q9Y458 520 aa6.14□□□□□ -1.43
FCF1-208ENST00000556814 ESYT3A0FGR9 886 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 CDC45O75419 566 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 MVKQ03426 396 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 LSAMPQ13449 338 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 TCEA2Q15560 299 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 NTRK3Q16288 839 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 INF2Q27J81 1249 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 MBLAC2Q68D91 279 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 C16orf86Q6ZW13 317 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 IFNL3Q8IZI9 196 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.13□□□□□ -1.43
FCF1-208ENST00000556814 USP33Q8TEY7 942 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 INTS4Q96HW7 963 aaKnown RBP6.13□□□□□ -1.43
FCF1-208ENST00000556814 MRPL4Q9BYD3 311 aaKnown RBP6.13□□□□□ -1.43
FCF1-208ENST00000556814 GULP1Q9UBP9 304 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 PCDHA2Q9Y5H9 948 aa6.13□□□□□ -1.43
FCF1-208ENST00000556814 ARNTLO00327 626 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 ENPP3O14638 875 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 PLD2O14939 933 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 GPR85P60893 370 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 TMEM62Q0P6H9 643 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 KIZQ2M2Z5 673 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 TAF7LQ5H9L4 462 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 MPZL3Q6UWV2 235 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 IRF2BP1Q8IU81 584 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 SIRT2Q8IXJ6 389 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 CHAMP1Q96JM3 812 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 KANSL2Q9H9L4 492 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 NCOA5Q9HCD5 579 aaKnown RBP6.12□□□□□ -1.43
FCF1-208ENST00000556814 FANCLQ9NW38 375 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 RWDD3Q9Y3V2 267 aa6.12□□□□□ -1.43
FCF1-208ENST00000556814 BLACEA4D250 179 aa6.11□□□□□ -1.43
FCF1-208ENST00000556814 H7BY64 318 aa6.11□□□□□ -1.43
FCF1-208ENST00000556814 CLSTN1O94985 981 aa6.11□□□□□ -1.43
FCF1-208ENST00000556814 MPOP05164 745 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms