RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 GDPD2Q9HCC8 539 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 VAT1LQ9HCJ6 419 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 TRIOBPQ9H2D6 2365 aa8.54□□□□□ -1.04
SCFD1-222ENST00000556768 ELP1O95163 1332 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 SYNRGQ9UMZ2 1314 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 A0A1W2PQ45 241 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-222ENST00000556768 A0A1W2PQY0 241 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 SGSM2O43147 1006 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 GJA9P57773 515 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 PADI6Q6TGC4 694 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 EEPD1Q7L9B9 569 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 RASGRP2Q7LDG7 609 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 CATIPQ7Z7H3 387 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 DNERQ8NFT8 737 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 PRO3102Q9H379 93 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 VTA1Q9NP79 307 aa8.53□□□□□ -1.04
SCFD1-222ENST00000556768 MRPL11Q9Y3B7 192 aaKnown RBP8.53□□□□□ -1.04
SCFD1-222ENST00000556768 SOWAHBA6NEL2 793 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 NFIBO00712 420 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 DYNC1LI2O43237 492 aaPredicted RBP8.52□□□□□ -1.04
SCFD1-222ENST00000556768 PQBP1O60828 265 aaKnown RBP8.52□□□□□ -1.04
SCFD1-222ENST00000556768 ADAMTS4O75173 837 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 CABYRO75952 493 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 ASGR1P07306 291 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 CYP21A2P08686 494 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 RPS6P62753 249 aaKnown RBP8.52□□□□□ -1.04
SCFD1-222ENST00000556768 TLE2Q04725 743 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 WTAPQ15007 396 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 CDC37Q16543 378 aaPredicted RBP8.52□□□□□ -1.04
SCFD1-222ENST00000556768 TRIM60Q495X7 471 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 TMCO4Q5TGY1 634 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 RNF20Q5VTR2 975 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 FBXO11Q86XK2 927 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 ADGRF4Q8IZF3 695 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 TMTC2Q8N394 836 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 TTC13Q8NBP0 860 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 KLHDC9Q8NEP7 349 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 MAP4K1Q92918 833 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 TOX2Q96NM4 488 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 SEZ6LQ9BYH1 1024 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 TMEM39AQ9NV64 488 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 Q9Y3F1 56 aa8.52□□□□□ -1.04
SCFD1-222ENST00000556768 ABCB11O95342 1321 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 KLRF2D3W0D1 207 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 E7EWF7 191 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 NEFLP07196 543 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 CLTBP09497 229 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 RAG1P15918 1043 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 CST5P28325 142 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-222ENST00000556768 PTH1RQ03431 593 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 SNX17Q15036 470 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 FSCN1Q16658 493 aaKnown RBP8.52□□□□□ -1.05
SCFD1-222ENST00000556768 TMEM67Q5HYA8 995 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 TLK2Q86UE8 772 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 LENG1Q96BZ8 264 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-222ENST00000556768 CCDC136Q96JN2 1154 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 AMNQ9BXJ7 453 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 WDR11Q9BZH6 1224 aa8.52□□□□□ -1.05
SCFD1-222ENST00000556768 GZF1Q9H116 711 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-222ENST00000556768 MYH8P13535 1937 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 A0A0U1RQG5 324 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-222ENST00000556768 TLR3O15455 904 aaKnown RBP8.51□□□□□ -1.05
SCFD1-222ENST00000556768 KIF5BP33176 963 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 CPT1AP50416 773 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 ALDH5A1P51649 535 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-222ENST00000556768 TUSC1Q2TAM9 212 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 LRIT3Q3SXY7 679 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 BMP2KLQ5H9B9 411 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 NFXL1Q6ZNB6 911 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 ANKRD33Q7Z3H0 272 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 FBXO16Q8IX29 292 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-222ENST00000556768 NSUN6Q8TEA1 469 aaKnown RBP8.51□□□□□ -1.05
SCFD1-222ENST00000556768 SCFD2Q8WU76 684 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 CLEC4DQ8WXI8 215 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 CALR3Q96L12 384 aaKnown RBP8.51□□□□□ -1.05
SCFD1-222ENST00000556768 FGD4Q96M96 766 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 IL25Q9H293 177 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 ANO2Q9NQ90 1003 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 RBM8AQ9Y5S9 174 aaKnown RBP8.51□□□□□ -1.05
SCFD1-222ENST00000556768 PLXNB2O15031 1838 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 ZNF236Q9UL36 1845 aa8.51□□□□□ -1.05
SCFD1-222ENST00000556768 NKRFO15226 690 aaKnown RBP eCLIP8.5□□□□□ -1.05
SCFD1-222ENST00000556768 MCM5P33992 734 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 PPP2R5BQ15173 497 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 DUSP28Q4G0W2 176 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 GPR153Q6NV75 609 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 CTCFLQ8NI51 663 aaPredicted RBP8.5□□□□□ -1.05
SCFD1-222ENST00000556768 MORC4Q8TE76 937 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 IWS1Q96ST2 819 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 RMDN3Q96TC7 470 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 MTA3Q9BTC8 594 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 KATNBL1Q9H079 304 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 UPF3AQ9H1J1 476 aaKnown RBP8.5□□□□□ -1.05
SCFD1-222ENST00000556768 CPVLQ9H3G5 476 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 JMJD4Q9H9V9 463 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 MAP3K20Q9NYL2 800 aaKnown RBP8.5□□□□□ -1.05
SCFD1-222ENST00000556768 PCDHA1Q9Y5I3 950 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 A0A0G2JMZ2 1700 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 RLFQ13129 1914 aa8.5□□□□□ -1.05
SCFD1-222ENST00000556768 GREB1LQ9C091 1923 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms