RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 SYNGAP1Q96PV0 1343 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 FRMPD3Q5JV73 1810 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 SEPT4O43236 478 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 FARP2O94887 1054 aaPredicted RBP11.1□□□□□ -0.63
MARK3-211ENST00000556744 NEFLP07196 543 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 PGK2P07205 417 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 COL6A1P12109 1028 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 SLC16A2P36021 539 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 ANTXR2P58335 489 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 TRDNQ13061 729 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 CCDC96Q2M329 555 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 ASPRV1Q53RT3 343 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 KIAA1211Q6ZU35 1233 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 IGDCC4Q8TDY8 1250 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 TRERF1Q96PN7 1200 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 USB1Q9BQ65 265 aaKnown RBP11.1□□□□□ -0.63
MARK3-211ENST00000556744 UBAC1Q9BSL1 405 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 ACAD9Q9H845 621 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 KAT14Q9H8E8 782 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 PLSCR2Q9NRY7 297 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 PPP4R2Q9NY27 417 aa11.1□□□□□ -0.63
MARK3-211ENST00000556744 DDX20Q9UHI6 824 aaKnown RBP11.1□□□□□ -0.63
MARK3-211ENST00000556744 CTDP1Q9Y5B0 961 aaPredicted RBP11.1□□□□□ -0.63
MARK3-211ENST00000556744 PALM3A6NDB9 673 aaPredicted RBP11.09□□□□□ -0.63
MARK3-211ENST00000556744 SLC27A2O14975 620 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 CDC45O75419 566 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 ZNF865P0CJ78 1059 aaPredicted RBP11.09□□□□□ -0.63
MARK3-211ENST00000556744 TROAPQ12815 778 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 IKQ13123 557 aaPredicted RBP11.09□□□□□ -0.63
MARK3-211ENST00000556744 IFIT1BQ5T764 474 aaKnown RBP11.09□□□□□ -0.63
MARK3-211ENST00000556744 CREB3L3Q68CJ9 461 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 BRICD5Q6PL45 260 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 ANKRD35Q8N283 1001 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 RGS22Q8NE09 1264 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 MORC4Q8TE76 937 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 CLEC4DQ8WXI8 215 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 KCNB2Q92953 911 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 MTMR8Q96EF0 704 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 DDX11Q96FC9 970 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 MAP3K14Q99558 947 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 A1CFQ9NQ94 594 aaKnown RBP11.09□□□□□ -0.63
MARK3-211ENST00000556744 RNF146Q9NTX7 359 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 PFASO15067 1338 aa11.09□□□□□ -0.63
MARK3-211ENST00000556744 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
MARK3-211ENST00000556744 LCTP09848 1927 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 SNAI1O95863 264 aaPredicted RBP11.08□□□□□ -0.64
MARK3-211ENST00000556744 SNAP25P60880 206 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
MARK3-211ENST00000556744 MUM1L1Q5H9M0 696 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 BLOC1S3Q6QNY0 202 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 NECAB2Q7Z6G3 386 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 CHMP4CQ96CF2 233 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 PAWRQ96IZ0 340 aaKnown RBP11.08□□□□□ -0.64
MARK3-211ENST00000556744 KRTAP3-3Q9BYR6 98 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 KRTAP3-2Q9BYR7 98 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 KATNBL1Q9H079 304 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 CYP39A1Q9NYL5 469 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 MAD2L2Q9UI95 211 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 CCPG1Q9ULG6 757 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 DNAH12Q6ZR08 3092 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 ASTN1O14525 1302 aa11.08□□□□□ -0.64
MARK3-211ENST00000556744 MCM3APO60318 1980 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 IFIT3O14879 490 aaKnown RBP11.07□□□□□ -0.64
MARK3-211ENST00000556744 EPB41L2O43491 1005 aaKnown RBP11.07□□□□□ -0.64
MARK3-211ENST00000556744 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
MARK3-211ENST00000556744 PARP1P09874 1014 aaKnown RBP11.07□□□□□ -0.64
MARK3-211ENST00000556744 GOLGA8HP0CJ92 632 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 ALAS1P13196 640 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 TAL1P17542 331 aaPredicted RBP11.07□□□□□ -0.64
MARK3-211ENST00000556744 NKX3-2P78367 333 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 GHRHRQ02643 423 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 COL9A3Q14050 684 aaPredicted RBP11.07□□□□□ -0.64
MARK3-211ENST00000556744 GRM4Q14833 912 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 PRAMEF19Q5SWL8 479 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 CCDC174Q6PII3 467 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 RNF19BQ6ZMZ0 732 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 RALYLQ86SE5 291 aaKnown RBP11.07□□□□□ -0.64
MARK3-211ENST00000556744 ADGRF4Q8IZF3 695 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 DIS3LQ8TF46 1054 aaKnown RBP11.07□□□□□ -0.64
MARK3-211ENST00000556744 HTATIP2Q9BUP3 242 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 UBA5Q9GZZ9 404 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 JMJD4Q9H9V9 463 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 SENP2Q9HC62 589 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 ALPK3Q96L96 1907 aa11.07□□□□□ -0.64
MARK3-211ENST00000556744 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
MARK3-211ENST00000556744 DNM1LO00429 736 aa11.06□□□□□ -0.64
MARK3-211ENST00000556744 MCM5P33992 734 aa11.06□□□□□ -0.64
MARK3-211ENST00000556744 LIFRP42702 1097 aa11.06□□□□□ -0.64
MARK3-211ENST00000556744 CNTN2Q02246 1040 aa11.06□□□□□ -0.64
MARK3-211ENST00000556744 WTAPQ15007 396 aa11.06□□□□□ -0.64
MARK3-211ENST00000556744 SART3Q15020 963 aaKnown RBP11.06□□□□□ -0.64
MARK3-211ENST00000556744 SLC35G1Q2M3R5 365 aa11.06□□□□□ -0.64
MARK3-211ENST00000556744 CASC1Q6TDU7 716 aa11.06□□□□□ -0.64
MARK3-211ENST00000556744 LYPD8Q6UX82 237 aa11.06□□□□□ -0.64
MARK3-211ENST00000556744 THSD4Q6ZMP0 1018 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms