RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TBC1D5Q92609 795 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 FERMT2Q96AC1 680 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 IWS1Q96ST2 819 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 RMDN3Q96TC7 470 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.47□□□□□ -0.73
ACTN1-218ENST00000556343 CYP39A1Q9NYL5 469 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 CLIC4Q9Y696 253 aa10.47□□□□□ -0.73
ACTN1-218ENST00000556343 MORC2Q9Y6X9 1032 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-218ENST00000556343 LOC102724159A0A0B4J2E5 919 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 OPLAHO14841 1288 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 NEMFO60524 1076 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 PRPF40AO75400 957 aaKnown RBP10.46□□□□□ -0.73
ACTN1-218ENST00000556343 STAM2O75886 525 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 CCND2P30279 289 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 CIITAP33076 1130 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 MCM7P33993 719 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 TOB1P50616 345 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-218ENST00000556343 KIF22Q14807 665 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 ARHGEF6Q15052 776 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 PWP2Q15269 919 aaKnown RBP10.46□□□□□ -0.73
ACTN1-218ENST00000556343 TMEM266Q2M3C6 531 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 EARS2Q5JPH6 523 aaKnown RBP10.46□□□□□ -0.73
ACTN1-218ENST00000556343 ARL6IP4Q66PJ3 421 aaKnown RBP10.46□□□□□ -0.73
ACTN1-218ENST00000556343 DTHD1Q6ZMT9 781 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 PLEKHH3Q7Z736 793 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 KRI1Q8N9T8 703 aaKnown RBP10.46□□□□□ -0.73
ACTN1-218ENST00000556343 TMEM87AQ8NBN3 555 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 RAB34Q9BZG1 259 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 TXNRD2Q9NNW7 524 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 A1CFQ9NQ94 594 aaKnown RBP10.46□□□□□ -0.73
ACTN1-218ENST00000556343 DDX25Q9UHL0 483 aaKnown RBP10.46□□□□□ -0.73
ACTN1-218ENST00000556343 CPA4Q9UI42 421 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 PCDHB6Q9Y5E3 794 aa10.46□□□□□ -0.73
ACTN1-218ENST00000556343 LOC285556D6RIA3 1793 aa10.46□□□□□ -0.74
ACTN1-218ENST00000556343 CYP3A7-CYP3A51PA0A087WV96 503 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 TBX3O15119 743 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 MAFGO15525 162 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 CUTAO60888 179 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 AOC2O75106 756 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 MBD3O95983 291 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 BCRP11274 1271 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 TAL1P17542 331 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-218ENST00000556343 CYP3A7P24462 503 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 PRPHP41219 470 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 UBE2HP62256 183 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 SETQ01105 290 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-218ENST00000556343 PTGDRQ13258 359 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 NFKBIBQ15653 356 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 CALCRLQ16602 461 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 GNPTABQ3T906 1256 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 Q4G0T1 1027 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 PCNX4Q63HM2 1172 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 ADALQ6DHV7 355 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 C17orf99Q6UX52 265 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 NLRX1Q86UT6 975 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 SLFN12Q8IYM2 578 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 CDHR1Q96JP9 859 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 PGBD1Q96JS3 809 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 TAAR1Q96RJ0 339 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 BEGAINQ9BUH8 593 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 PXMP2Q9NR77 195 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 FAM13BQ9NYF5 915 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
ACTN1-218ENST00000556343 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 SLC15A5A6NIM6 579 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 ASB14A6NK59 587 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 OR52Z1P0C646 297 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 MYCLP12524 364 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-218ENST00000556343 PTPREP23469 700 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 TXLNAP40222 546 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 VEGFBP49765 207 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 FCGRTP55899 365 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 ATP2C1P98194 919 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-218ENST00000556343 CRHR2Q13324 411 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 PTPAQ15257 358 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 STXBP2Q15833 593 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 CEP55Q53EZ4 464 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 SLC30A10Q6XR72 485 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 NIPA1Q7RTP0 329 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 GPR142Q7Z601 462 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 DPP9Q86TI2 863 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
ACTN1-218ENST00000556343 FAM20AQ96MK3 541 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 MXRA8Q9BRK3 442 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 ANP32EQ9BTT0 268 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 EFCC1Q9HA90 598 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 GDPD2Q9HCC8 539 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 TCEAL9Q9UHQ7 104 aa10.44□□□□□ -0.74
ACTN1-218ENST00000556343 DIS3Q9Y2L1 958 aaKnown RBP10.44□□□□□ -0.74
ACTN1-218ENST00000556343 SRPRBQ9Y5M8 271 aaKnown RBP10.44□□□□□ -0.74
ACTN1-218ENST00000556343 PTPRFP10586 1907 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 RPTORQ8N122 1335 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 A0A1W2PQ27 194 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 A0A1W2PQ64 194 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 A0A1W2PQD8 194 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 ADAMTS3O15072 1205 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 EIF3JO75822 258 aaKnown RBP10.43□□□□□ -0.74
ACTN1-218ENST00000556343 NR3C2P08235 984 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 HSPA6P17066 643 aa10.43□□□□□ -0.74
ACTN1-218ENST00000556343 EIF2AK2P19525 551 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms