RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 DYNC1LI2O43237 492 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-221ENST00000556342 SMPD1P17405 629 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 IGFBP4P22692 258 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 PTGS1P23219 599 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 CCL23P55773 120 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 PDE4BQ07343 736 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 CCDC85BQ15834 202 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-221ENST00000556342 TKFCQ3LXA3 575 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 OTOP2Q7RTS6 562 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 IFNL3Q8IZI9 196 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 ADAMTS19Q8TE59 1207 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 CHURC1Q8WUH1 139 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 STAG1Q8WVM7 1258 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 NOC4LQ9BVI4 516 aaKnown RBP12.72□□□□□ -0.37
SYNE2-221ENST00000556342 SEZ6LQ9BYH1 1024 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 AP5M1Q9H0R1 490 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 WNT8AQ9H1J5 351 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 SLC28A3Q9HAS3 691 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 YBX2Q9Y2T7 364 aaKnown RBP12.72□□□□□ -0.37
SYNE2-221ENST00000556342 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
SYNE2-221ENST00000556342 NCOR1O75376 2440 aa12.72□□□□□ -0.37
SYNE2-221ENST00000556342 MYH4Q9Y623 1939 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 ZEB2O60315 1214 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 B4GALT4O60513 344 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 PLA2G6O60733 806 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 SLC1A4P43007 532 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 MRPS5P82675 430 aaKnown RBP12.71□□□□□ -0.37
SYNE2-221ENST00000556342 TFAP4Q01664 338 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 IKQ13123 557 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-221ENST00000556342 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 TRERF1Q96PN7 1200 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 NACAP1Q9BZK3 213 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 TRPV6Q9H1D0 765 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 PDGFCQ9NRA1 345 aa12.71□□□□□ -0.37
SYNE2-221ENST00000556342 SLC3A2P08195 630 aaKnown RBP12.7□□□□□ -0.38
SYNE2-221ENST00000556342 ALAS1P13196 640 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 MCCP23508 829 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 RABGGTBP53611 331 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 PSMC6P62333 389 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 PPARAQ07869 468 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 LRRFIP1Q32MZ4 808 aaKnown RBP12.7□□□□□ -0.38
SYNE2-221ENST00000556342 MUM1L1Q5H9M0 696 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 IQSEC1Q6DN90 963 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 TAPT1Q6NXT6 567 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 EEPD1Q7L9B9 569 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 FBXO16Q8IX29 292 aaPredicted RBP12.7□□□□□ -0.38
SYNE2-221ENST00000556342 CHMP4CQ96CF2 233 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 NAPBQ9H115 298 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 CYP39A1Q9NYL5 469 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 Q9Y3F1 56 aa12.7□□□□□ -0.38
SYNE2-221ENST00000556342 SNAP25P60880 206 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 HIC1Q14526 733 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 TMEM63BQ5T3F8 832 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 C20orf194Q5TEA3 1177 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 PPP2R2DQ66LE6 453 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 RPUSD2Q8IZ73 545 aaKnown RBP12.69□□□□□ -0.38
SYNE2-221ENST00000556342 MORC4Q8TE76 937 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 VWCEQ96DN2 955 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 UHRF1Q96T88 793 aaPredicted RBP12.69□□□□□ -0.38
SYNE2-221ENST00000556342 SEC62Q99442 399 aaKnown RBP12.69□□□□□ -0.38
SYNE2-221ENST00000556342 DCTPP1Q9H773 170 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 VTA1Q9NP79 307 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 PLA2G2EQ9NZK7 142 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 TSR3Q9UJK0 312 aaKnown RBP12.69□□□□□ -0.38
SYNE2-221ENST00000556342 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 PRR12Q9ULL5 1215 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 STX8Q9UNK0 236 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.69□□□□□ -0.38
SYNE2-221ENST00000556342 SLC4A7Q9Y6M7 1214 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 BDP1A6H8Y1 2624 aa12.69□□□□□ -0.38
SYNE2-221ENST00000556342 LRRC37A2A6NM11 1700 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 MYOGP15173 224 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 NSMFQ6X4W1 530 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 RASGRP2Q7LDG7 609 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 IL27Q8NEV9 243 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 SCLYQ96I15 445 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
SYNE2-221ENST00000556342 ALDH8A1Q9H2A2 487 aaPredicted RBP12.68□□□□□ -0.38
SYNE2-221ENST00000556342 CCPG1Q9ULG6 757 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 PCDHA11Q9Y5I1 949 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 XIRP2A4UGR9 3374 aa12.68□□□□□ -0.38
SYNE2-221ENST00000556342 TSPY2A6NKD2 308 aa12.67□□□□□ -0.38
SYNE2-221ENST00000556342 ZBBXA8MT70 800 aa12.67□□□□□ -0.38
SYNE2-221ENST00000556342 NMT2O60551 498 aa12.67□□□□□ -0.38
SYNE2-221ENST00000556342 PFKMP08237 780 aa12.67□□□□□ -0.38
SYNE2-221ENST00000556342 CYP2C9P11712 490 aa12.67□□□□□ -0.38
SYNE2-221ENST00000556342 ATP2A2P16615 1042 aaKnown RBP12.67□□□□□ -0.38
SYNE2-221ENST00000556342 DUSP28Q4G0W2 176 aa12.67□□□□□ -0.38
SYNE2-221ENST00000556342 ZMYM1Q5SVZ6 1142 aa12.67□□□□□ -0.38
SYNE2-221ENST00000556342 IL17RBQ9NRM6 502 aa12.67□□□□□ -0.38
SYNE2-221ENST00000556342 TRMT13Q9NUP7 481 aaKnown RBP12.67□□□□□ -0.38
SYNE2-221ENST00000556342 REV3LO60673 3130 aa12.67□□□□□ -0.38
SYNE2-221ENST00000556342 TNKSO95271 1327 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 TTC41PQ6P2S7 1318 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 GPR37O15354 613 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 FOXP2O15409 715 aa12.66□□□□□ -0.38
SYNE2-221ENST00000556342 ICAM1P05362 532 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms