RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 CAMK2GQ13555 558 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-240ENST00000556339 SNAP47Q5SQN1 464 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 TMEM151BQ8IW70 566 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 RELTQ969Z4 430 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 LTV1Q96GA3 475 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-240ENST00000556339 SLC12A5Q9H2X9 1139 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 ZNF552Q9H707 407 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-240ENST00000556339 SPON1Q9HCB6 807 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 SIRT5Q9NXA8 310 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 TERF2IPQ9NYB0 399 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 TIMELESSQ9UNS1 1208 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 KCTD3Q9Y597 815 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 TTC21AQ8NDW8 1320 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 CPDO75976 1380 aa5.39□□□□□ -1.55
ATXN3-240ENST00000556339 ABCA3Q99758 1704 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 KIAA1210Q9ULL0 1709 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 RBM47A0AV96 593 aaKnown RBP5.38□□□□□ -1.55
ATXN3-240ENST00000556339 CHURC1-FNTBB4DL54 471 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 KCNQ2O43526 872 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 USP2O75604 605 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-240ENST00000556339 HTR3BO95264 441 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 LMNB2Q03252 620 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 NMIQ13287 307 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-240ENST00000556339 ARHGEF25Q86VW2 580 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 KIF2CQ99661 725 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 MRS2Q9HD23 443 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 STK32BQ9NY57 414 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 IRAK3Q9Y616 596 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 USP19O94966 1318 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 AATKQ6ZMQ8 1374 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 TONSLQ96HA7 1378 aa5.38□□□□□ -1.55
ATXN3-240ENST00000556339 CAMTA1Q9Y6Y1 1673 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 RGPD1P0DJD0 1748 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 FKTNO75072 461 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 RAG1P15918 1043 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 AMPHP49418 695 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 PCBP3P57721 371 aaKnown RBP5.37□□□□□ -1.55
ATXN3-240ENST00000556339 RNF4P78317 190 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 SRSF3P84103 164 aaKnown RBP5.37□□□□□ -1.55
ATXN3-240ENST00000556339 FAM160A1Q05DH4 1040 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 PWP1Q13610 501 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 OLFML2BQ68BL8 750 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 RNF111Q6ZNA4 994 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 CEP128Q6ZU80 1094 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 NME9Q86XW9 330 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 MARCH10Q8NA82 808 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-240ENST00000556339 FAM161BQ96MY7 647 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 VTI1BQ9UEU0 232 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 WDR17Q8IZU2 1322 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 USP6P35125 1406 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 CRB1P82279 1406 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 NRAPQ86VF7 1730 aa5.37□□□□□ -1.55
ATXN3-240ENST00000556339 FAM221AA4D161 298 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 MINDY4BA8MYZ0 360 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 PLSCR1O15162 318 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 SASH1O94885 1247 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 IL2RBP14784 551 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 PI3P19957 117 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 DAB2P98082 770 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 GOLM1Q8NBJ4 401 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 ENOX1Q8TC92 643 aaKnown RBP5.36□□□□□ -1.55
ATXN3-240ENST00000556339 CRELD1Q96HD1 420 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 COG3Q96JB2 828 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 SIGLEC10Q96LC7 697 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 TMEM74Q96NL1 305 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 FOXP3Q9BZS1 431 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 EBF1Q9UH73 591 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 TCFL5Q9UL49 500 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 PARD3Q8TEW0 1356 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 QRICH2Q9H0J4 1663 aa5.36□□□□□ -1.55
ATXN3-240ENST00000556339 PHRF1Q9P1Y6 1649 aaKnown RBP5.35□□□□□ -1.55
ATXN3-240ENST00000556339 OVOS2A0A0G2JMS6 1433 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 OVOS2A0A0J9YW53 1432 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 OVOS2Q6IE36 1432 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 USP31Q70CQ4 1352 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 ST20-MTHFSA0A0A6YYL1 179 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 ZBTB7AO95365 584 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 YY1P25490 414 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 MPP2Q14168 576 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 SSPNQ14714 243 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 NFIXQ14938 502 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 TXNRD1Q16881 649 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 PTF1AQ7RTS3 328 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 SYTL5Q8TDW5 730 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-240ENST00000556339 LINC01599Q8WXQ3 324 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 MAP6Q96JE9 813 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 C20orf173Q96LM9 149 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 POLR3GLQ9BT43 218 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 GCM1Q9NP62 436 aa5.35□□□□□ -1.55
ATXN3-240ENST00000556339 RGPD5Q99666 1765 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 COL5A2P05997 1499 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-240ENST00000556339 CCDC7Q96M83 1385 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 TLR3O15455 904 aaKnown RBP5.34□□□□□ -1.55
ATXN3-240ENST00000556339 SORBS3O60504 671 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 FOXD2O60548 495 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-240ENST00000556339 SYPP08247 313 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 SYN1P17600 705 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 ARL4AP40617 200 aa5.34□□□□□ -1.55
ATXN3-240ENST00000556339 KIR2DL1P43626 348 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms