RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 DOCK1Q14185 1865 aa8.46□□□□□ -1.06
ATXN3-236ENST00000556220 PDS5AQ29RF7 1337 aaKnown RBP8.46□□□□□ -1.06
ATXN3-236ENST00000556220 LTBP2Q14767 1821 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 CACNA1FO60840 1977 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 GRXCR1A8MXD5 290 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 EPXP11678 715 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 IGFBP4P22692 258 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 ADORA1P30542 326 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 GSTO1P78417 241 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 SHROOM1Q2M3G4 852 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-236ENST00000556220 TMEM31Q5JXX7 168 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 LBX2Q6XYB7 198 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 CCDC129Q6ZRS4 1044 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 WDR63Q8IWG1 891 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 TEX11Q8IYF3 940 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 NSUN4Q96CB9 384 aaKnown RBP8.45□□□□□ -1.06
ATXN3-236ENST00000556220 C12orf42Q96LP6 360 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 TOX2Q96NM4 488 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 SPOCK3Q9BQ16 436 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.45□□□□□ -1.06
ATXN3-236ENST00000556220 BTBD7Q9P203 1132 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 LOC285556D6RIA3 1793 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 MAST2Q6P0Q8 1798 aa8.45□□□□□ -1.06
ATXN3-236ENST00000556220 STRNO43815 780 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 RAD21O60216 631 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
ATXN3-236ENST00000556220 TIMP1P01033 207 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 ITGB2P05107 769 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 AMPD1P23109 780 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 ADORA2AP29274 412 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 IL15P40933 162 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-236ENST00000556220 TIMM10P62072 90 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 TNP2Q05952 138 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 FAAP100Q0VG06 881 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 AAK1Q2M2I8 961 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 FAM47AQ5JRC9 791 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 TMEM240Q5SV17 173 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 PRAMEF19Q5SWL8 479 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 RASIP1Q5U651 963 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 C16orf59Q7L2K0 433 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 SLC44A5Q8NCS7 719 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 SIL1Q9H173 461 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 DNAJC18Q9H819 358 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 AVENQ9NQS1 362 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-236ENST00000556220 SCHIP1Q9P0W5 487 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-236ENST00000556220 ZBTB21Q9ULJ3 1066 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 DOCK2Q92608 1830 aa8.44□□□□□ -1.06
ATXN3-236ENST00000556220 RLFQ13129 1914 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 CHD9Q3L8U1 2897 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 COBLO75128 1261 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 MAPTP10636 758 aaKnown RBP8.43□□□□□ -1.06
ATXN3-236ENST00000556220 HOXB4P17483 251 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-236ENST00000556220 USP14P54578 494 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 PPIGQ13427 754 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATXN3-236ENST00000556220 NCOA4Q13772 614 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 MFSD5Q6N075 450 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 CCDC174Q6PII3 467 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 LINC00114Q6XXX2 140 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 ANKRD33Q7Z3H0 272 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 RNF180Q86T96 592 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 SH3RF3Q8TEJ3 882 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-236ENST00000556220 BTBD6Q96KE9 485 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 XPNPEP3Q9NQH7 507 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 SLC5A4Q9NY91 659 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 MSRAQ9UJ68 235 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 USP3Q9Y6I4 520 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 CHD7Q9P2D1 2997 aa8.43□□□□□ -1.06
ATXN3-236ENST00000556220 MYH2Q9UKX2 1941 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 DCDC2CA8MYV0 355 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 ERC2O15083 957 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 GH2P01242 217 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 FAM157BP0CG42 384 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 RARBP10826 455 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 ADH6P28332 368 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 TFF2Q03403 129 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 RAB30Q15771 203 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 ZYXQ15942 572 aaKnown RBP8.42□□□□□ -1.06
ATXN3-236ENST00000556220 SAMD5Q5TGI4 173 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 CRACR2BQ8N4Y2 399 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-236ENST00000556220 TGFBRAP1Q8WUH2 860 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 HERVK_113Q902F9 699 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 SNX27Q96L92 541 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 MOV10L1Q9BXT6 1211 aaKnown RBP8.42□□□□□ -1.06
ATXN3-236ENST00000556220 ZNF358Q9NW07 568 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 RAI14Q9P0K7 980 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 NRBP1Q9UHY1 535 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 TBX21Q9UL17 535 aa8.42□□□□□ -1.06
ATXN3-236ENST00000556220 TCF20Q9UGU0 1960 aaKnown RBP8.41□□□□□ -1.06
ATXN3-236ENST00000556220 A0A1W2PQ45 241 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-236ENST00000556220 A0A1W2PQY0 241 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 DCDC2BA2VCK2 349 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 KHNYNO15037 678 aaKnown RBP8.41□□□□□ -1.06
ATXN3-236ENST00000556220 BAG3O95817 575 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 PGK1P00558 417 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 PROCP04070 461 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 VCAM1P19320 739 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 ERCC3P19447 782 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 KCNQ1P51787 676 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 ZNF365Q70YC5 407 aa8.41□□□□□ -1.06
ATXN3-236ENST00000556220 MAPKAPK5Q8IW41 473 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms