RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 PLA2G5P39877 138 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 RABGGTBP53611 331 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 OAZ1P54368 228 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 HNRNPUQ00839 825 aaKnown RBP eCLIP6.93□□□□□ -1.3
PRKCH-220ENST00000556164 CNTN2Q02246 1040 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 TNFAIP2Q03169 654 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 IKQ13123 557 aaPredicted RBP6.93□□□□□ -1.3
PRKCH-220ENST00000556164 ITGA7Q13683 1181 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 FSCN1Q16658 493 aaKnown RBP6.93□□□□□ -1.3
PRKCH-220ENST00000556164 SBK1Q52WX2 424 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 TLK2Q86UE8 772 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 RPAP2Q8IXW5 612 aaPredicted RBP6.93□□□□□ -1.3
PRKCH-220ENST00000556164 LRRC47Q8N1G4 583 aaKnown RBP6.93□□□□□ -1.3
PRKCH-220ENST00000556164 PNMA1Q8ND90 353 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 CHMP4CQ96CF2 233 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 FAM122AQ96E09 287 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 NECAB3Q96P71 396 aaPredicted RBP6.93□□□□□ -1.3
PRKCH-220ENST00000556164 NOC4LQ9BVI4 516 aaKnown RBP6.93□□□□□ -1.3
PRKCH-220ENST00000556164 KATNBL1Q9H079 304 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 AP5M1Q9H0R1 490 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 ACAD9Q9H845 621 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 BOLA1Q9Y3E2 137 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 SLC4A7Q9Y6M7 1214 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 TANC1Q9C0D5 1861 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 ASTN1O14525 1302 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 IGKV6D-41A0A0C4DH26 115 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 ASB14A6NK59 587 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 GSG1L2A8MUP6 293 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 LZTS3O60299 673 aaPredicted RBP6.92□□□□□ -1.3
PRKCH-220ENST00000556164 ZEB2O60315 1214 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 B4GALT4O60513 344 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 CABYRO75952 493 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 TTLL1O95922 423 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 BMP3P12645 472 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 MYOGP15173 224 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 PTGS1P23219 599 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 TDO2P48775 406 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 PSMC6P62333 389 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 NKX3-2P78367 333 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 TFF2Q03403 129 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 SLFN13Q68D06 897 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 GIMAP6Q6P9H5 292 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 EEPD1Q7L9B9 569 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 PLEKHM2Q8IWE5 1019 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 FBXO16Q8IX29 292 aaPredicted RBP6.92□□□□□ -1.3
PRKCH-220ENST00000556164 SIRT2Q8IXJ6 389 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 RPUSD2Q8IZ73 545 aaKnown RBP6.92□□□□□ -1.3
PRKCH-220ENST00000556164 ZNF444Q8N0Y2 327 aaPredicted RBP6.92□□□□□ -1.3
PRKCH-220ENST00000556164 FAM133AQ8N9E0 248 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 SLC43A3Q8NBI5 491 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 C1orf216Q8TAB5 229 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 CEP95Q96GE4 821 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 SCLYQ96I15 445 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 STRBPQ96SI9 672 aaKnown RBP6.92□□□□□ -1.3
PRKCH-220ENST00000556164 TRPV6Q9H1D0 765 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 WNT8AQ9H1J5 351 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 ZNF287Q9HBT7 754 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 A1CFQ9NQ94 594 aaKnown RBP6.92□□□□□ -1.3
PRKCH-220ENST00000556164 RNF146Q9NTX7 359 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 COL4A4P53420 1690 aaPredicted RBP6.92□□□□□ -1.3
PRKCH-220ENST00000556164 CHD9Q3L8U1 2897 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 TET1Q8NFU7 2136 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 CHD7Q9P2D1 2997 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 REV3LO60673 3130 aa6.92□□□□□ -1.3
PRKCH-220ENST00000556164 PTPRSQ13332 1948 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 SCN10AQ9Y5Y9 1956 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 SOWAHBA6NEL2 793 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 TMEM232C9JQI7 657 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 DYNC1LI2O43237 492 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-220ENST00000556164 APPP05067 770 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 TSPY3P0CV98 308 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 TSPY8P0CW00 308 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 ALAS1P13196 640 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 ATP2A2P16615 1042 aaKnown RBP6.91□□□□□ -1.3
PRKCH-220ENST00000556164 SMPD1P17405 629 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 KCNQ1P51787 676 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 STAT2P52630 851 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 AAK1Q2M2I8 961 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 PDCD7Q8N8D1 485 aaKnown RBP6.91□□□□□ -1.3
PRKCH-220ENST00000556164 GMCL1P1Q8NEA9 526 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 APPBP2Q92624 585 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 MKL1Q969V6 931 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 AGBL1Q96MI9 1066 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 TRERF1Q96PN7 1200 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 LRRCC1Q9C099 1032 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 EPB41L4AQ9HCS5 686 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-220ENST00000556164 PDGFCQ9NRA1 345 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 CUEDC1Q9NWM3 386 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-220ENST00000556164 MTMR4Q9NYA4 1195 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 EGFL7Q9UHF1 273 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 DDX19BQ9UMR2 479 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 PCDHGA10Q9Y5H3 936 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 PCDHA11Q9Y5I1 949 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 DDX49Q9Y6V7 483 aaKnown RBP6.91□□□□□ -1.3
PRKCH-220ENST00000556164 GRIN2DO15399 1336 aa6.91□□□□□ -1.3
PRKCH-220ENST00000556164 TTLL13PA6NNM8 815 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 M0R2C6 588 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 RFXAPO00287 272 aa6.9□□□□□ -1.3
PRKCH-220ENST00000556164 RNF113AO15541 343 aaKnown RBP6.9□□□□□ -1.3
PRKCH-220ENST00000556164 GPAA1O43292 621 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms